Detailed information NTG1161738

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: U8955_RS08670
• Genome accession: NZ_OY769914
• Coordinates: 1725598..1726527 (-)
• Length: 309 a.a.
• NCBI ID: WP_038804566.1
• Uniprot ID: A0A7T3DZ59
• Organism: Streptococcus oralis subsp. dentisani isolate Streptococcus dentisani 7746
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1720598..1731527

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U8955_RS08650 (SDENT7746_08680)	-	1720717..1721280 (-)	564	WP_038804562.1	ECF transporter S component	-
U8955_RS08655 (SDENT7746_08685)	-	1721813..1722316 (-)	504	WP_038804563.1	tRNA (cytidine(34)-2'-O)-methyltransferase	-
U8955_RS08660 (SDENT7746_08690)	trkA	1722717..1724066 (+)	1350	WP_038804564.1	Trk system potassium transporter TrkA	-
U8955_RS08665 (SDENT7746_08695)	-	1724070..1725509 (+)	1440	WP_038804565.1	TrkH family potassium uptake protein	-
U8955_RS08670 (SDENT7746_08700)	amiF	1725598..1726527 (-)	930	WP_038804566.1	ATP-binding cassette domain-containing protein	Regulator
U8955_RS08675 (SDENT7746_08705)	amiE	1726538..1727605 (-)	1068	WP_038804567.1	ABC transporter ATP-binding protein	Regulator
U8955_RS08680 (SDENT7746_08710)	amiD	1727614..1728540 (-)	927	WP_000103692.1	oligopeptide ABC transporter permease OppC	Regulator
U8955_RS08685 (SDENT7746_08715)	amiC	1728540..1730036 (-)	1497	WP_000759921.1	ABC transporter permease	Regulator

Sequence

Protein

• Length: 309 a.a.
• Molecular weight: 35042.27 Da
• Isoelectric Point: 6.9903

>NTDB_id=1161738 U8955_RS08670 WP_038804566.1 1725598..1726527(-) (amiF) [Streptococcus oralis subsp. dentisani isolate Streptococcus dentisani 7746]
MSEKLVEIKDLEISFGEGSKKFVAVKNANFFINKGETFSLVGESGSGKTTIGRAIIGLNNTSKGEIIFDGQKINGKKSHK
ESADLIRRIQMIFQDPAASLNERATVDYIISEGLYNYHLFKDEEDRKEKVQKMIHEVGLLKEHLTRYPHEFSGGQRQRIG
IARALVMEPDFVIADEPISALDVSVRAQVLNLLKKFQKELGLTYLFIAHDLSVVRFISDRIAVIYKGVIVEVAETEELFN
NPVHPYTQALLSAVPIPDPILERKKVLKVYDPDQHDYETDKPSMVEIRPGHYVWANQAELARYKEALKK

Nucleotide

• Length: 930 bp

>NTDB_id=1161738 U8955_RS08670 WP_038804566.1 1725598..1726527(-) (amiF) [Streptococcus oralis subsp. dentisani isolate Streptococcus dentisani 7746]
ATGTCTGAAAAATTAGTAGAAATTAAAGATTTAGAAATTTCCTTCGGTGAAGGAAGTAAGAAGTTTGTGGCGGTTAAAAA
CGCCAACTTCTTTATCAACAAGGGAGAAACTTTCTCTCTTGTTGGTGAGTCTGGTAGTGGGAAAACAACGATTGGTCGTG
CCATTATTGGTTTAAATAACACTAGTAAAGGTGAGATTATCTTTGATGGCCAGAAAATCAATGGGAAAAAATCTCATAAG
GAATCAGCAGACTTAATCCGTCGTATCCAGATGATTTTCCAGGATCCTGCAGCAAGCTTGAATGAGCGTGCGACTGTTGA
CTATATCATCTCTGAAGGTCTTTACAACTACCACTTGTTTAAAGATGAAGAAGATCGAAAAGAAAAAGTTCAAAAGATGA
TCCATGAAGTTGGACTTTTGAAAGAACACTTAACCCGTTATCCACACGAGTTTTCTGGTGGTCAACGTCAGCGTATCGGG
ATTGCCCGTGCCCTTGTGATGGAACCTGATTTTGTTATTGCAGATGAGCCAATTTCAGCCTTGGACGTATCAGTGCGTGC
GCAAGTCTTGAACTTGCTCAAGAAGTTCCAAAAAGAGTTGGGCTTGACCTATCTCTTTATCGCGCATGACTTGTCAGTTG
TTCGCTTTATCTCAGATCGTATCGCGGTTATCTATAAGGGAGTCATCGTCGAAGTGGCGGAGACAGAGGAGTTGTTTAAC
AATCCTGTCCACCCATATACTCAGGCGCTTCTATCTGCTGTACCGATTCCAGATCCAATCTTGGAACGCAAGAAGGTCTT
GAAAGTTTACGATCCTGACCAACATGATTATGAGACAGACAAGCCATCTATGGTGGAAATTCGTCCAGGTCACTATGTTT
GGGCCAATCAAGCAGAACTTGCTCGTTACAAGGAAGCTCTTAAAAAATAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

• ABC transporter (ABC_tran) (25-178)

3D structure

• AlphaFold DB: A0A7T3DZ59

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus salivarius strain HSISS4	85.113	100	0.851
amiF	Streptococcus thermophilus LMG 18311	84.142	100	0.841
amiF	Streptococcus thermophilus LMD-9	83.819	100	0.838