Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   U8955_RS04875 Genome accession   NZ_OY769914
Coordinates   968047..968856 (+) Length   269 a.a.
NCBI ID   WP_038805202.1    Uniprot ID   A0A428BPK5
Organism   Streptococcus oralis subsp. dentisani isolate Streptococcus dentisani 7746     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 963047..973856
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U8955_RS04855 (SDENT7746_04860) pta 963700..964674 (+) 975 WP_000451592.1 phosphate acetyltransferase -
  U8955_RS04860 (SDENT7746_04865) mutY 964761..965939 (+) 1179 WP_038805200.1 A/G-specific adenine glycosylase -
  U8955_RS04865 (SDENT7746_04870) micA 965996..966703 (+) 708 WP_038805201.1 response regulator YycF Regulator
  U8955_RS04870 (SDENT7746_04875) micB 966696..968045 (+) 1350 WP_000568724.1 cell wall metabolism sensor histidine kinase VicK Regulator
  U8955_RS04875 (SDENT7746_04880) vicX 968047..968856 (+) 810 WP_038805202.1 MBL fold metallo-hydrolase Regulator
  U8955_RS04880 (SDENT7746_04885) - 968873..969811 (+) 939 WP_125415224.1 hypothetical protein -
  U8955_RS04885 (SDENT7746_04890) - 970235..970582 (-) 348 WP_038805205.1 thiol reductase thioredoxin -
  U8955_RS04890 (SDENT7746_04895) - 970694..972412 (-) 1719 WP_038805206.1 phospho-sugar mutase -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 29934.94 Da        Isoelectric Point: 6.1738

>NTDB_id=1161725 U8955_RS04875 WP_038805202.1 968047..968856(+) (vicX) [Streptococcus oralis subsp. dentisani isolate Streptococcus dentisani 7746]
MSEIGFKYSILASGSSGNSFYLETPKKKILVDAGLSGKKITSLLSEINRKPEDLDAILITHEHSDHIHGVGVLARKYGMD
LYANEKTWQAMENSKYLGKVDSSQKHIFEMGKTKTFGDIDIESFGVSHDAVAPQFYRFMKDDKSFVMLTDTGYVSDRMAG
IVENADGYLIESNHDVEILRAGSYAWRLKQRILSDIGHLSNEDGAEAMIRAMGNRTKKIYLGHLSKENNIKELAHMTMVN
QLAQADLGVGVDFKVYDTSPDTATPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1161725 U8955_RS04875 WP_038805202.1 968047..968856(+) (vicX) [Streptococcus oralis subsp. dentisani isolate Streptococcus dentisani 7746]
ATGAGTGAAATAGGCTTTAAATACAGTATTTTAGCATCAGGTTCCAGTGGAAATTCCTTTTATCTGGAAACCCCAAAAAA
GAAAATCTTAGTGGATGCAGGCTTGTCTGGTAAGAAAATTACCAGTCTCTTGAGTGAAATCAACCGCAAACCTGAGGATC
TGGATGCGATTTTGATTACGCATGAGCATTCCGACCATATTCATGGAGTCGGTGTATTGGCTCGTAAGTATGGTATGGAC
CTTTACGCTAATGAGAAAACTTGGCAGGCTATGGAAAATAGCAAGTACCTCGGCAAGGTGGATTCATCGCAGAAGCACAT
TTTTGAAATGGGTAAAACCAAAACCTTTGGTGACATCGACATCGAGAGTTTTGGTGTTAGCCATGATGCAGTCGCACCTC
AGTTTTATCGCTTTATGAAAGATGACAAGAGTTTTGTCATGTTGACCGATACAGGTTATGTTAGTGACCGTATGGCAGGG
ATTGTCGAGAATGCTGACGGTTATCTCATCGAGTCCAACCACGATGTGGAAATCTTGAGAGCAGGTTCTTATGCTTGGCG
ACTCAAACAGCGAATTCTATCGGATATCGGTCACCTTTCTAACGAAGACGGTGCTGAGGCCATGATTCGTGCAATGGGAA
ATCGAACCAAGAAAATCTATCTTGGTCACTTGTCCAAAGAGAACAATATTAAGGAGCTGGCTCATATGACTATGGTCAAC
CAGCTAGCACAAGCTGATCTGGGAGTCGGAGTTGACTTTAAGGTTTACGACACTTCTCCAGATACCGCAACACCATTGAC
AGATATATAG

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A428BPK5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.952

100

0.77

Multiple sequence alignment