Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   U8955_RS01945 Genome accession   NZ_OY769914
Coordinates   358304..360286 (+) Length   660 a.a.
NCBI ID   WP_038804123.1    Uniprot ID   A0A7T3A0B4
Organism   Streptococcus oralis subsp. dentisani isolate Streptococcus dentisani 7746     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 353304..365286
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U8955_RS01925 (SDENT7746_01955) - 353527..354411 (+) 885 WP_068981897.1 hypothetical protein -
  U8955_RS01930 (SDENT7746_01960) - 354548..355963 (+) 1416 WP_038804126.1 flippase -
  U8955_RS01935 (SDENT7746_01965) - 355964..356962 (+) 999 WP_038804125.1 acyltransferase -
  U8955_RS01940 (SDENT7746_01970) glf 356976..358076 (+) 1101 WP_038804124.1 UDP-galactopyranose mutase -
  U8955_RS01945 (SDENT7746_01975) amiA3 358304..360286 (+) 1983 WP_038804123.1 peptide ABC transporter substrate-binding protein Regulator

Sequence

Protein


Download         Length: 660 a.a.        Molecular weight: 73129.72 Da        Isoelectric Point: 4.7303

>NTDB_id=1161707 U8955_RS01945 WP_038804123.1 358304..360286(+) (amiA3) [Streptococcus oralis subsp. dentisani isolate Streptococcus dentisani 7746]
MKSSKLFALAGVTLLAATTLAACSGSGSSAKGEKTFSYIYETDPDNLNYLTTGKAATTEITSNVVDGLLENDRYGNFVPS
MAEDWSVSKDGLTYTYTIRKDAKWYTSEGEEYAAVKAQDFVTGLKYAADKKSDALYLVQESIKGLDAYVKGEIKDFSQVG
IKALDDQTVQYTLNKPESFWNSKTTMGVMAPVNEEFLNSKGDDFAKGTDPSSILYNGPFLLKSIVAKSSVEFAKNPNYWD
KDNVHLDKVKLSFWDGQDTNKPAEAFKDGSFTMARLFPTSASYPEIEKSFKDNIVYTQQDSTTYLVGTNIDRQSYKYTSK
TTDEEKTSTKKALLNKDFRQALAFGFDRTAYASQVNGASGATKLLRNLFVPPTFVQADGKNFGELVKEKLVTYGDEWKDV
NLADAQDGLYNADKAKAEFAKAKTALQAEGVKFPIHLDMPVDQTNTTKVQRVQSFKQSLEATLGSENVVVDIQQLQKDDV
LNITYFAETAAGEDWDISDNVGWSPDFADPSTYLDIIKPSVGENTKTYLGFDSGTNNAAAKQVGLEDYEKMVVEAGEEVS
DVSKRYEKYAAAQAWLTDSALIIPTTSKTGRPMLSKMVPFTLPFAYSGNKGTSEALLYKYLDVQDKPVTAEEYQKAQEKW
MKEKEESNKKAQEDLAKHVK

Nucleotide


Download         Length: 1983 bp        

>NTDB_id=1161707 U8955_RS01945 WP_038804123.1 358304..360286(+) (amiA3) [Streptococcus oralis subsp. dentisani isolate Streptococcus dentisani 7746]
ATGAAAAGTTCAAAACTATTTGCCCTTGCGGGCGTGACATTATTGGCGGCGACTACTTTAGCTGCATGCTCTGGATCAGG
TTCGAGCGCTAAAGGAGAGAAGACATTCTCATACATTTATGAGACAGACCCTGACAACCTCAACTATTTAACAACTGGTA
AAGCTGCGACAACAGAGATTACCAGTAACGTGGTTGATGGTTTGCTAGAAAATGATCGCTACGGGAACTTTGTGCCGTCT
ATGGCTGAGGATTGGTCTGTATCCAAGGATGGATTGACTTACACTTATACTATCCGTAAGGATGCAAAATGGTATACTTC
TGAAGGTGAAGAATACGCGGCAGTCAAAGCTCAAGACTTTGTAACAGGACTTAAGTATGCGGCTGATAAAAAATCAGATG
CTCTTTACCTTGTCCAAGAATCGATCAAAGGATTGGACGCCTATGTAAAAGGGGAAATCAAAGATTTCTCACAAGTAGGA
ATTAAGGCTCTGGATGATCAGACAGTTCAGTACACTTTGAACAAACCAGAAAGCTTCTGGAATTCTAAGACAACAATGGG
GGTAATGGCTCCAGTTAACGAAGAGTTTTTGAACTCTAAAGGGGATGATTTCGCCAAAGGGACAGATCCTAGTAGTATTC
TCTATAATGGACCATTCTTACTCAAATCAATTGTTGCTAAATCTTCTGTTGAATTTGCGAAAAATCCAAACTATTGGGAT
AAGGATAATGTCCATCTTGATAAGGTCAAGTTGTCATTCTGGGATGGCCAAGATACCAACAAACCAGCTGAAGCCTTCAA
GGATGGAAGCTTTACTATGGCACGTCTCTTCCCAACAAGCGCTAGCTACCCAGAGATTGAGAAATCATTTAAAGATAACA
TCGTTTATACCCAACAGGATTCGACTACTTATTTAGTAGGTACGAATATTGATCGCCAGTCTTATAAGTATACTTCTAAG
ACAACGGATGAAGAAAAAACATCTACCAAGAAAGCTCTTCTAAACAAAGATTTCCGTCAAGCTCTTGCTTTTGGTTTTGA
TAGAACTGCCTATGCCTCTCAAGTAAACGGTGCAAGTGGTGCGACTAAACTGCTTCGTAACTTGTTTGTTCCACCTACAT
TTGTTCAAGCAGATGGCAAAAACTTTGGTGAGTTGGTCAAAGAAAAATTGGTGACATATGGAGACGAGTGGAAGGATGTA
AATTTAGCTGATGCCCAAGATGGACTCTATAACGCAGATAAGGCCAAAGCAGAATTTGCCAAAGCTAAGACAGCTCTTCA
AGCAGAAGGTGTGAAATTCCCAATCCACTTGGATATGCCAGTAGACCAAACCAATACAACAAAAGTTCAACGTGTTCAAT
CCTTCAAACAATCGCTTGAAGCTACTCTAGGGTCAGAGAACGTCGTTGTTGATATCCAACAACTTCAAAAAGATGATGTC
TTGAATATCACTTACTTTGCTGAAACTGCAGCTGGAGAAGACTGGGATATCTCAGATAACGTGGGATGGTCTCCAGACTT
TGCAGACCCATCTACTTACCTTGATATCATCAAGCCATCTGTCGGAGAAAATACAAAGACTTACCTAGGATTTGACTCTG
GAACAAACAACGCTGCAGCTAAGCAAGTTGGTTTGGAAGACTACGAAAAAATGGTTGTAGAAGCCGGGGAAGAAGTGAGT
GACGTTTCAAAACGTTATGAGAAATATGCTGCTGCCCAAGCTTGGTTGACCGATAGTGCCTTGATCATCCCAACAACTTC
TAAAACTGGTCGTCCAATGTTGTCTAAGATGGTACCATTTACGCTTCCGTTTGCATACTCTGGTAACAAGGGTACAAGCG
AAGCCCTCTTGTATAAATACCTAGACGTACAAGATAAACCAGTGACAGCAGAAGAATATCAAAAAGCTCAAGAAAAATGG
ATGAAAGAAAAAGAAGAGTCGAATAAAAAGGCTCAAGAAGATCTTGCAAAACATGTGAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(77-520)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7T3A0B4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMD-9

59.909

100

0.6
  amiA3 Streptococcus thermophilus LMG 18311

59.304

100

0.594
  amiA Streptococcus salivarius strain HSISS4

58.85

100

0.589

Multiple sequence alignment