Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Regulator
Locus tag   U8955_RS01615 Genome accession   NZ_OY769914
Coordinates   287690..288313 (+) Length   207 a.a.
NCBI ID   WP_080641267.1    Uniprot ID   A0A7T2ZXY0
Organism   Streptococcus oralis subsp. dentisani isolate Streptococcus dentisani 7746     
Function   fratricide immunity (predicted from homology)   
Competence regulation

Genomic Context

Location: 282690..293313
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U8955_RS01610 (SDENT7746_01640) rpoC 283743..287408 (+) 3666 WP_038804178.1 DNA-directed RNA polymerase subunit beta' -
  U8955_RS01615 (SDENT7746_01645) comM 287690..288313 (+) 624 WP_080641267.1 hypothetical protein Regulator
  U8955_RS01620 (SDENT7746_01650) tsaE 288417..288860 (+) 444 WP_000288225.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  U8955_RS01625 (SDENT7746_01655) - 288850..289371 (+) 522 WP_038804177.1 GNAT family N-acetyltransferase -
  U8955_RS01630 (SDENT7746_01660) brpA 289376..290410 (+) 1035 WP_038804176.1 biofilm formation/cell division transcriptional regulator BrpA -
  U8955_RS01635 (SDENT7746_01665) cinA 290483..291739 (+) 1257 WP_038804175.1 competence/damage-inducible protein A Machinery gene
  U8955_RS01640 (SDENT7746_01670) recA 291794..292945 (+) 1152 WP_038804174.1 recombinase RecA Machinery gene

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23565.49 Da        Isoelectric Point: 9.9911

>NTDB_id=1161700 U8955_RS01615 WP_080641267.1 287690..288313(+) (comM) [Streptococcus oralis subsp. dentisani isolate Streptococcus dentisani 7746]
MIKSIRILLLLALLQISLSSCLLWKGAILTLKQSSAYFLVFIVLTSGLCAGMNFFYTRDQDVHSIINSQKKVKLFYSTLL
VLNLVGVCLVLSETILTQTAFQQELVDLFLPSFFFLFGIDLLVFLPLEKYSRELGSTLNKKKTVVLTVLATLLFLRNPMT
VLSIVFYVGLGFIFARFLFPKSMRREFSFYGHVIRDILLVSAVCIFF

Nucleotide


Download         Length: 624 bp        

>NTDB_id=1161700 U8955_RS01615 WP_080641267.1 287690..288313(+) (comM) [Streptococcus oralis subsp. dentisani isolate Streptococcus dentisani 7746]
ATGATAAAATCAATTCGCATCTTATTGTTACTGGCTTTGCTTCAGATTAGTCTGAGTAGTTGCTTGCTGTGGAAGGGAGC
CATCTTAACCTTAAAGCAGTCAAGCGCCTATTTTCTAGTGTTTATCGTATTGACATCAGGTCTGTGTGCGGGCATGAATT
TCTTTTATACTCGAGATCAGGATGTTCATAGCATTATAAACAGTCAGAAAAAAGTGAAACTATTTTATAGTACCTTGTTG
GTCTTAAACCTAGTAGGTGTCTGTCTGGTATTGTCGGAGACTATTTTAACACAGACAGCTTTTCAGCAAGAGTTGGTAGA
CCTTTTCTTGCCTTCCTTCTTTTTCTTGTTTGGCATTGATTTACTTGTCTTTTTACCGCTTGAAAAATACAGTCGAGAAT
TGGGAAGCACTCTCAATAAGAAAAAAACAGTTGTCCTGACGGTTCTGGCAACCTTGCTGTTCTTGAGAAATCCAATGACA
GTTTTATCCATTGTTTTTTATGTCGGTTTGGGATTCATTTTTGCTCGGTTTTTATTTCCAAAATCTATGAGAAGAGAATT
TTCCTTTTACGGTCATGTGATCCGAGATATTTTACTTGTTAGCGCCGTGTGTATATTCTTTTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7T2ZXY0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Streptococcus pneumoniae D39

59.709

99.517

0.594
  comM Streptococcus pneumoniae R6

59.709

99.517

0.594
  comM Streptococcus pneumoniae TIGR4

59.709

99.517

0.594
  comM Streptococcus mitis SK321

43.655

95.169

0.415
  comM Streptococcus mitis NCTC 12261

43.147

95.169

0.411

Multiple sequence alignment