Detailed information NTG0116095

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: MARPU_RS10230
• Genome accession: NZ_CP007031
• Coordinates: 2331118..2332428 (+)
• Length: 436 a.a.
• NCBI ID: WP_043763542.1
• Uniprot ID: W0E593
• Organism: Marichromatium purpuratum 984
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 2326118..2337428

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MARPU_RS10215 (MARPU_10390)	sucD	2326838..2327704 (-)	867	WP_005224300.1	succinate--CoA ligase subunit alpha	-
MARPU_RS10220 (MARPU_10395)	sucC	2327701..2328885 (-)	1185	WP_005224301.1	ADP-forming succinate--CoA ligase subunit beta	-
MARPU_RS10225 (MARPU_10400)	-	2329083..2330702 (+)	1620	WP_005224302.1	PAS domain-containing sensor histidine kinase	-
MARPU_RS10230 (MARPU_10405)	pilR	2331118..2332428 (+)	1311	WP_043763542.1	sigma-54 dependent transcriptional regulator	Regulator
MARPU_RS10235 (MARPU_10410)	argA	2332470..2333792 (+)	1323	WP_005224304.1	amino-acid N-acetyltransferase	-
MARPU_RS10240 (MARPU_10415)	-	2333918..2337376 (+)	3459	WP_232229459.1	mechanosensitive ion channel domain-containing protein	-

Sequence

Protein

• Length: 436 a.a.
• Molecular weight: 47718.68 Da
• Isoelectric Point: 6.5493

>NTDB_id=116095 MARPU_RS10230 WP_043763542.1 2331118..2332428(+) (pilR) [Marichromatium purpuratum 984]
MPTDKAQALVVDDETDILELLRITLARMEIRAVTATTLIEARTRLAEQSFDLCLTDMKLPDGSGIELIRHIAAHHPELPV
AMITAYGNMDSAIEAMKAGAFDFVSKPVELQRLRQLVGAALKLAHRPGGEHGGERVPQLLGDSLAMAQIRQLIAKLARSQ
APVFVTGESGTGKELAARLIHAQGPRRDGPFVALNCGAIPHDLVESELFGHKKGSFTGASSDKQGLFQAAEGGTLFLDEV
AELPLQTQVKLLRAIQEKAVRPLGTQHELPVDVRLISASHRDLNAEVERGRFRQDLFYRINVIELRMPPLRERRGDIPAL
ADWLLARIAEKSGADTPRHLAPEALAALAHHPFPGNVRELENILERATALCEHSLIEVGDLYLPDPASTHHDTAPEITAP
PTAPTEPTHWDHAAAARRLGMSQRSLHYRLARLGIE

Nucleotide

• Length: 1311 bp

>NTDB_id=116095 MARPU_RS10230 WP_043763542.1 2331118..2332428(+) (pilR) [Marichromatium purpuratum 984]
ATGCCGACTGACAAGGCCCAGGCGCTCGTCGTCGACGACGAGACCGATATCCTCGAACTGCTGCGGATCACCCTCGCGCG
GATGGAGATCCGCGCGGTGACCGCCACCACCCTGATCGAGGCGCGTACGCGCCTCGCCGAGCAGTCCTTCGACCTCTGTC
TGACCGATATGAAGCTGCCCGACGGCAGCGGCATCGAGCTGATCCGTCATATCGCCGCGCACCACCCGGAGCTGCCGGTG
GCGATGATCACCGCCTACGGCAACATGGACTCGGCGATCGAGGCGATGAAGGCCGGCGCCTTCGACTTCGTCTCCAAGCC
GGTGGAACTGCAGCGCCTGCGCCAGCTCGTCGGCGCCGCGCTCAAGCTCGCCCACCGCCCCGGCGGCGAGCACGGCGGCG
AGCGCGTCCCCCAGTTGCTCGGCGACTCCCTGGCGATGGCGCAGATCCGCCAGCTCATCGCCAAACTCGCGCGCAGCCAG
GCACCGGTGTTCGTCACCGGCGAGAGCGGCACCGGCAAGGAACTGGCCGCGCGGCTGATCCACGCCCAGGGGCCACGGCG
CGACGGTCCCTTCGTCGCGCTCAACTGCGGCGCTATCCCCCACGACCTGGTCGAGAGCGAGCTGTTCGGCCACAAGAAGG
GTAGTTTCACCGGCGCCAGCAGCGACAAACAGGGCCTGTTCCAGGCCGCCGAGGGCGGCACCCTGTTCCTCGACGAAGTC
GCCGAGCTGCCGCTGCAGACCCAGGTCAAGCTGCTGCGCGCGATCCAGGAGAAGGCGGTGCGACCGCTTGGCACCCAGCA
CGAGCTGCCGGTCGACGTGCGCCTGATCAGCGCCAGCCACCGCGACCTCAACGCCGAGGTCGAGCGCGGACGCTTCCGCC
AGGACCTCTTCTATCGCATCAATGTCATCGAGCTGCGCATGCCGCCGCTGCGCGAGCGACGCGGGGACATCCCCGCGCTG
GCCGACTGGCTGCTCGCGCGCATCGCCGAAAAGAGCGGCGCCGACACCCCGCGTCACCTCGCCCCCGAGGCGCTGGCCGC
GCTCGCCCATCACCCCTTCCCGGGCAACGTGCGCGAACTCGAGAACATCCTCGAACGCGCCACCGCGCTGTGCGAGCACA
GCCTGATCGAGGTCGGCGACCTCTACCTGCCCGACCCCGCCTCGACACACCACGACACCGCGCCCGAGATCACTGCACCA
CCGACCGCGCCCACCGAGCCGACGCACTGGGACCATGCCGCCGCCGCGCGACGCCTGGGCATGTCACAGCGCTCGCTGCA
CTATCGGCTCGCCCGGCTCGGTATCGAATAA

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (140-305)

• Response regulator receiver domain (Response_reg) (9-117)

3D structure

• AlphaFold DB: W0E593

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	56.951	100	0.583
pilR	Acinetobacter baumannii strain A118	47.948	100	0.509