Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   ACI6PA_RS04520 Genome accession   NZ_OY724190
Coordinates   933515..934783 (+) Length   422 a.a.
NCBI ID   WP_057866779.1    Uniprot ID   -
Organism   Companilactobacillus crustorum strain IMDO BLLM15     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 928515..939783
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACI6PA_RS04495 (CCBLLM15_CCBLLM15_00912) tsf 929144..930022 (+) 879 WP_057866774.1 translation elongation factor Ts -
  ACI6PA_RS04500 (CCBLLM15_CCBLLM15_00913) pyrH 930653..931387 (+) 735 WP_057866775.1 UMP kinase -
  ACI6PA_RS04505 (CCBLLM15_CCBLLM15_00914) frr 931377..931934 (+) 558 WP_057866776.1 ribosome recycling factor -
  ACI6PA_RS04510 (CCBLLM15_CCBLLM15_00915) - 931939..932682 (+) 744 WP_057866777.1 isoprenyl transferase -
  ACI6PA_RS04515 (CCBLLM15_CCBLLM15_00916) - 932701..933495 (+) 795 WP_057866778.1 phosphatidate cytidylyltransferase -
  ACI6PA_RS04520 (CCBLLM15_CCBLLM15_00917) eeP 933515..934783 (+) 1269 WP_057866779.1 RIP metalloprotease RseP Regulator
  ACI6PA_RS04525 (CCBLLM15_CCBLLM15_00918) - 934798..936504 (+) 1707 WP_057866780.1 proline--tRNA ligase -

Sequence


Protein


Download         Length: 422 a.a.        Molecular weight: 45739.31 Da        Isoelectric Point: 9.9255

>NTDB_id=1160436 ACI6PA_RS04520 WP_057866779.1 933515..934783(+) (eeP) [Companilactobacillus crustorum strain IMDO BLLM15]
MTAIITFIIVFGILVIVHEFGHYYAAKKSGILVREFSVGMGPKIVAYRKNHTTYTLRLLPLGGYVRMAGAQEDDSEIQPG
TMASLVLNDNDKVIKIITSSKVYDANAVPVQISKADLVDDLVIEGYENGDETVTKKYSVNHDATIIEEDGTEVQIAPRDV
QLQSVSVWKRMITNFAGPFNNFVLAILATILAAFMMGSVGTGTNQLGGIENNSVAQKAGLKANDKILSVNGKKTTSWTSL
TESIQNNPGKKLTLNVQSGNKTKQVKLTPKAVKSSGQSYGMIGIKAKLDSSVLGKIKYGFTYSWSTSLTIFHALGKMVSG
GFNINQLSGPVGIYSMTSKVASTGLINIILFTSMLSMNLGIVNLIPIPALDGGKILLNIVEAIRRKPIPEQYENVITLIG
VGILVLLMIAVTWNDIQRFFIK

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=1160436 ACI6PA_RS04520 WP_057866779.1 933515..934783(+) (eeP) [Companilactobacillus crustorum strain IMDO BLLM15]
ATGACCGCGATAATTACATTTATAATCGTTTTTGGTATTTTAGTAATCGTTCATGAATTTGGACACTATTATGCTGCAAA
AAAATCAGGAATTTTGGTTCGTGAGTTTTCTGTTGGTATGGGTCCTAAAATTGTTGCGTATCGGAAAAATCATACGACGT
ATACTTTGAGGCTATTGCCTTTGGGTGGATATGTTCGTATGGCTGGTGCGCAGGAAGATGATTCCGAAATTCAACCAGGA
ACAATGGCATCTTTAGTTTTAAATGATAATGACAAAGTAATAAAAATAATAACTTCAAGTAAAGTTTATGATGCAAACGC
GGTTCCAGTTCAAATCTCAAAAGCTGATCTTGTAGATGATTTAGTAATTGAAGGATATGAGAATGGTGATGAAACAGTCA
CTAAGAAGTATTCCGTAAATCATGATGCAACTATCATTGAGGAAGACGGAACAGAAGTCCAAATTGCTCCTCGTGATGTT
CAATTGCAGTCTGTTTCCGTATGGAAACGTATGATCACCAATTTTGCTGGACCATTTAATAATTTTGTTTTGGCCATTTT
AGCAACTATTTTGGCTGCTTTTATGATGGGTTCAGTTGGAACCGGAACCAATCAATTGGGCGGAATTGAAAACAATTCTG
TGGCCCAAAAGGCTGGTTTAAAAGCAAATGATAAGATTTTAAGCGTTAATGGCAAGAAAACGACTTCGTGGACTAGTCTG
ACTGAGAGTATTCAAAATAATCCTGGGAAAAAATTAACGTTAAACGTACAGTCTGGTAATAAGACAAAACAAGTCAAGTT
GACTCCAAAAGCGGTCAAATCTTCTGGTCAAAGTTATGGAATGATTGGAATAAAGGCTAAATTGGATTCAAGTGTCCTTG
GTAAGATCAAATATGGATTTACATATAGCTGGAGTACATCATTAACCATTTTCCATGCTTTAGGAAAAATGGTTTCAGGA
GGCTTTAATATTAATCAGCTGTCGGGACCAGTGGGAATCTATTCAATGACTTCTAAGGTAGCCTCAACAGGTTTGATCAA
TATAATTCTCTTTACATCAATGTTATCGATGAACTTAGGTATTGTTAATTTGATACCTATTCCTGCTTTAGATGGTGGGA
AAATTCTTCTAAATATTGTTGAAGCAATTAGAAGAAAGCCAATTCCAGAACAGTATGAAAATGTTATTACATTAATTGGA
GTCGGAATCTTAGTTCTATTGATGATTGCTGTTACATGGAATGACATCCAGCGCTTCTTTATAAAATAG

Domains


Predicted by InterproScan.

(6-407)

(212-257)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

47.887

100

0.483

  eeP Streptococcus thermophilus LMD-9

47.653

100

0.481


Multiple sequence alignment