Detailed information    

insolico Bioinformatically predicted

Overview


Name   ciaH   Type   Regulator
Locus tag   QOR71_RS05075 Genome accession   NZ_OX461103
Coordinates   980272..981585 (-) Length   437 a.a.
NCBI ID   WP_000042570.1    Uniprot ID   A0A853P3V4
Organism   Streptococcus agalactiae isolate MRI Z2-149     
Function   Required for optimal comC expression (predicted from homology)   
Competence regulation

Genomic Context


Location: 975272..986585
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QOR71_RS05055 - 976752..977525 (-) 774 WP_000622398.1 DUF3307 domain-containing protein -
  QOR71_RS05060 - 977515..978201 (-) 687 WP_000280308.1 SatD family protein -
  QOR71_RS05065 ffh 978268..979833 (-) 1566 WP_000863589.1 signal recognition particle protein -
  QOR71_RS05070 - 979851..980183 (-) 333 WP_000402075.1 putative DNA-binding protein -
  QOR71_RS05075 ciaH 980272..981585 (-) 1314 WP_000042570.1 HAMP domain-containing sensor histidine kinase Regulator
  QOR71_RS05080 ciaR 981569..982249 (-) 681 WP_000590620.1 response regulator transcription factor Regulator
  QOR71_RS05085 - 982411..984960 (-) 2550 WP_000859382.1 M1 family metallopeptidase -
  QOR71_RS05090 phoU 985106..985759 (-) 654 WP_000946330.1 phosphate signaling complex protein PhoU -
  QOR71_RS05095 pstB 985793..986551 (-) 759 WP_000193363.1 phosphate ABC transporter ATP-binding protein PstB -

Sequence


Protein


Download         Length: 437 a.a.        Molecular weight: 49659.07 Da        Isoelectric Point: 9.3853

>NTDB_id=1159769 QOR71_RS05075 WP_000042570.1 980272..981585(-) (ciaH) [Streptococcus agalactiae isolate MRI Z2-149]
MSKPIKISKFKKNVSDSHFIHFFTVFSGIFLVMTVIILQVMRYGVYSSVDSSLKYISTHPKNYINMVMSHTAAYLDNSNI
ASVKLKPGGQTVANTDIILFTSEEEVINYFDAFSNYQFLKPNKKNLGGISELTLTNIFGQDETYHAVTVKVNNPAYPNVT
YMTAIVNIDQLVNAKERYEKIIIFVMTTFWIISIGASIYLAKWAQKPIIENYERQKAFVENASHELRTPLAVLQNRLETL
FRKPNATILENSENIASSLDEVRNMRILTTNLLNLARRDDGIKPELAVIKPTLFDSIFENYDLIAQENGKNFTGHNMIQD
SFKTDKTLLKQLMTILFDNAIKYTDNDGSIDFTISETDKYLFLEIADNGPGISEEDKVRIFDRFYRVDKARTRQQGGFGL
GLSLAQQIVNSLRGNITVIDNKPRGSIFKIKLPKVKG

Nucleotide


Download         Length: 1314 bp        

>NTDB_id=1159769 QOR71_RS05075 WP_000042570.1 980272..981585(-) (ciaH) [Streptococcus agalactiae isolate MRI Z2-149]
ATGTCGAAACCGATTAAGATAAGTAAATTCAAAAAAAATGTCTCAGATAGTCATTTTATCCATTTTTTCACAGTTTTTAG
TGGTATTTTTCTGGTTATGACTGTTATCATCCTCCAAGTCATGCGCTATGGTGTTTATTCTTCTGTTGATAGTAGTTTAA
AGTATATCAGTACCCATCCTAAAAATTACATCAATATGGTTATGTCACATACTGCTGCCTACCTAGATAACTCCAATATC
GCAAGTGTCAAGTTAAAACCCGGCGGTCAGACAGTAGCTAATACTGATATTATTCTTTTTACATCAGAAGAAGAAGTCAT
TAACTATTTTGACGCATTTTCAAACTATCAGTTTTTAAAACCTAATAAAAAAAATCTAGGTGGCATTAGTGAATTAACTT
TAACCAACATCTTTGGTCAAGATGAGACATATCATGCTGTCACCGTAAAAGTTAATAACCCTGCTTATCCTAATGTGACT
TACATGACAGCTATTGTTAATATTGATCAATTAGTAAATGCTAAAGAACGCTATGAAAAAATTATTATATTTGTCATGAC
TACTTTTTGGATTATTTCAATTGGAGCAAGTATCTACTTAGCTAAATGGGCACAAAAACCGATTATAGAAAACTACGAAA
GACAGAAGGCTTTTGTCGAAAATGCTAGCCACGAGCTGCGTACTCCCCTAGCTGTCTTACAAAATCGCCTAGAAACGCTA
TTCAGAAAACCGAATGCCACCATTTTAGAAAATAGTGAAAATATCGCTTCAAGTCTAGATGAAGTACGAAATATGCGTAT
TTTAACCACTAATCTTTTAAACTTAGCAAGACGTGATGATGGAATCAAACCAGAATTAGCTGTTATTAAGCCTACACTTT
TTGATAGTATCTTTGAGAATTATGATCTAATCGCCCAAGAGAATGGTAAAAATTTTACTGGACATAATATGATCCAAGAT
AGTTTCAAAACAGATAAGACACTGCTAAAACAACTCATGACTATTTTATTTGATAATGCTATAAAATATACTGACAATGA
TGGTAGCATTGACTTTACCATATCTGAAACTGATAAGTATCTCTTTTTAGAAATCGCTGATAATGGACCAGGAATTTCAG
AGGAGGATAAAGTCAGAATTTTTGATCGTTTTTACCGTGTTGACAAAGCAAGAACACGACAACAAGGAGGGTTTGGCCTC
GGCCTTTCTTTAGCTCAACAAATCGTTAACTCACTGCGAGGTAATATTACAGTAATTGATAATAAACCTAGAGGCAGTAT
TTTTAAGATAAAACTACCAAAAGTAAAAGGTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A853P3V4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ciaH Streptococcus mutans UA159

60.606

98.169

0.595

  ciaH Streptococcus pneumoniae Rx1

51.905

96.11

0.499

  ciaH Streptococcus pneumoniae D39

51.905

96.11

0.499

  ciaH Streptococcus pneumoniae R6

51.905

96.11

0.499

  ciaH Streptococcus pneumoniae TIGR4

51.905

96.11

0.499


Multiple sequence alignment