Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   QOR59_RS03710 Genome accession   NZ_OX460985
Coordinates   671496..672500 (+) Length   334 a.a.
NCBI ID   WP_001090813.1    Uniprot ID   -
Organism   Streptococcus agalactiae isolate MRI Z2-307     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 666496..677500
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QOR59_RS03690 - 666533..667372 (+) 840 WP_000034790.1 SDR family oxidoreductase -
  QOR59_RS03695 - 667525..668337 (+) 813 WP_000228641.1 HAD hydrolase-like protein -
  QOR59_RS03700 - 668353..670143 (+) 1791 WP_000149451.1 glycoside hydrolase family 3 N-terminal domain-containing protein -
  QOR59_RS03705 - 670201..671286 (-) 1086 WP_000040811.1 Xaa-Pro peptidase family protein -
  QOR59_RS03710 ccpA 671496..672500 (+) 1005 WP_001090813.1 catabolite control protein A Regulator
  QOR59_RS03715 - 672632..674098 (+) 1467 WP_000180582.1 alpha-amylase -
  QOR59_RS03720 - 674143..675141 (+) 999 WP_000866345.1 glycosyltransferase -
  QOR59_RS03725 - 675143..676477 (+) 1335 WP_001219475.1 glycosyltransferase family 4 protein -

Sequence

Protein


Download         Length: 334 a.a.        Molecular weight: 36665.78 Da        Isoelectric Point: 5.9937

>NTDB_id=1159599 QOR59_RS03710 WP_001090813.1 671496..672500(+) (ccpA) [Streptococcus agalactiae isolate MRI Z2-307]
MNTDYTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILARGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTEKIRAEFSRSRTPIVLAGTVDLEHQLPS
VNIDYKAAAVDVIDILAGNHKDIAFVSGPLIDDINGKVRLAGYKEGLKKNGLNFKEGLVFEANYRYAEGFALAQRVINAG
ATAAYVAEDELAAGLLNGLFEAGKRVPEDFEIITSNDSPIAQYTRPNLTSISQPVYDLGAVSMRMLTKIMHKEELEEKEI
VLNHGIVKRGTTNN

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=1159599 QOR59_RS03710 WP_001090813.1 671496..672500(+) (ccpA) [Streptococcus agalactiae isolate MRI Z2-307]
ATGAATACAGATTATACGATTACGATTTATGATGTTGCCCGTGAAGCAGGTGTTTCGATGGCAACTGTTAGTCGTGTGGT
AAATGGAAATAAAAATGTCAAGGAAAATACACGTAAGAAAGTCCTTGAAGTTATTGATCGTCTTGACTATCGTCCAAATG
CTGTGGCGCGTGGTTTAGCAAGTAAAAAAACGACAACTGTTGGTGTTGTCATTCCTAATATCGCAAATAGCTACTTTTCA
ATTTTAGCGCGTGGTATTGATGATATTGCAGCAATGTACAAATATAACATTGTCCTTGCTTCAAGTGATGAAGACGATGA
TAAAGAGGTTAATGTTGTTAATACTTTGTTTGCTAAGCAAGTAGACGGTATTATTTTTATGGGACACCACTTAACTGAAA
AGATTCGTGCAGAGTTCTCTCGTTCACGCACACCGATTGTTTTAGCAGGTACTGTGGACCTTGAGCATCAATTACCAAGT
GTTAATATCGATTACAAAGCAGCAGCAGTTGATGTTATTGATATTTTAGCTGGCAATCATAAAGACATTGCTTTTGTATC
AGGACCACTTATTGACGATATTAATGGCAAGGTTCGTTTGGCAGGATACAAAGAAGGTCTCAAGAAAAATGGCTTAAACT
TTAAAGAGGGGTTGGTTTTTGAAGCCAACTACCGTTATGCTGAAGGCTTTGCATTAGCTCAACGCGTGATTAATGCTGGA
GCAACAGCAGCATATGTTGCTGAGGATGAGTTAGCGGCAGGTTTGTTAAATGGTCTTTTTGAGGCAGGTAAACGTGTCCC
TGAAGATTTTGAAATTATCACAAGCAATGACTCGCCAATCGCACAATATACACGTCCTAACTTAACTTCTATCAGTCAAC
CGGTTTATGATTTGGGTGCTGTTAGCATGCGTATGCTAACAAAAATTATGCACAAAGAAGAGTTGGAAGAAAAAGAAATA
GTGCTTAATCACGGGATTGTTAAACGTGGCACAACAAATAATTAG

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(179-332)

Bacterial regulatory proteins, lacI family (LacI)

(8-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.614

99.401

0.781
  ccpA Streptococcus pneumoniae D39

76.807

99.401

0.763
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

57.751

98.503

0.569

Multiple sequence alignment