Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicK   Type   Regulator
Locus tag   QOR45_RS03905 Genome accession   NZ_OX460935
Coordinates   716117..717466 (+) Length   449 a.a.
NCBI ID   WP_001065467.1    Uniprot ID   -
Organism   Streptococcus agalactiae isolate MRI Z2-286     
Function   repress comCDE expression; repress comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 711117..722466
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QOR45_RS03875 - 711522..712088 (+) 567 WP_000592390.1 PepSY domain-containing protein -
  QOR45_RS03880 - 712137..712787 (-) 651 WP_000100034.1 amino acid ABC transporter permease -
  QOR45_RS03885 - 712799..713494 (-) 696 WP_000173639.1 amino acid ABC transporter permease -
  QOR45_RS03890 - 713507..714307 (-) 801 WP_000946171.1 transporter substrate-binding domain-containing protein -
  QOR45_RS03895 - 714319..715074 (-) 756 WP_000053150.1 amino acid ABC transporter ATP-binding protein -
  QOR45_RS03900 vicR 715414..716124 (+) 711 WP_000722052.1 response regulator YycF Regulator
  QOR45_RS03905 vicK 716117..717466 (+) 1350 WP_001065467.1 cell wall metabolism sensor histidine kinase VicK Regulator
  QOR45_RS03910 vicX 717470..718279 (+) 810 WP_001289498.1 MBL fold metallo-hydrolase Regulator
  QOR45_RS03915 - 718282..718648 (+) 367 Protein_691 YbaN family protein -
  QOR45_RS03920 rnc 718824..719510 (+) 687 WP_000661525.1 ribonuclease III -

Sequence

Protein


Download         Length: 449 a.a.        Molecular weight: 51041.09 Da        Isoelectric Point: 4.8621

>NTDB_id=1158982 QOR45_RS03905 WP_001065467.1 716117..717466(+) (vicK) [Streptococcus agalactiae isolate MRI Z2-286]
MNNSAANIRSFELALLFLLVFVAVYFVYLAVRDFKMSKNIRLLNWKVRDLIAGNYSDSILIQGDADLVELGESLNDLSDV
FRMAHDNLEQEKNRLASILTYMTDGVLATDRSGKIVMINETAQQQFNLAYDEALSMNIVDILGSGSPYSFQDLVSKTPEV
VLNRRDENGEFVTLRIRFALNRRESGFISGLVAVSHDATEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALNE
EVAPSFIKVSLDETNRMMRMISDLLSLSRIDNEVTHLDVEMTNFTAFMTSILNRFDQIRNQKTVTGKVYEIVRDYPLKSI
WVEIDTDKMTQVIDNILNNAVKYSPDGGKITVNLRTTKTQMILSISDQGLGIPKKDLPLIFDRFYRVDKARSRQQGGTGL
GLSIAKEIVKQHKGFIWAKSEYGKGSTFTIVLPYDKDAVTYEEWEDVED

Nucleotide


Download         Length: 1350 bp        

>NTDB_id=1158982 QOR45_RS03905 WP_001065467.1 716117..717466(+) (vicK) [Streptococcus agalactiae isolate MRI Z2-286]
ATGAATAATAGTGCTGCAAATATTAGGTCGTTTGAGCTAGCCTTACTTTTTTTACTAGTTTTTGTTGCTGTCTATTTTGT
TTATCTAGCGGTTAGAGATTTTAAAATGTCTAAAAATATCCGGCTTTTGAATTGGAAAGTCAGAGATTTGATAGCAGGAA
ATTATTCAGATAGTATTCTAATTCAAGGTGATGCAGATTTGGTAGAATTAGGTGAAAGTCTAAATGATTTATCTGATGTC
TTCCGAATGGCACATGATAACTTAGAACAAGAAAAGAATCGCTTAGCAAGTATCTTAACTTATATGACTGACGGTGTGCT
GGCTACAGATCGTTCAGGAAAAATCGTTATGATTAATGAGACAGCCCAACAGCAGTTCAATCTAGCATATGATGAAGCTT
TATCAATGAATATTGTTGATATATTAGGGTCAGGAAGTCCATATTCGTTCCAAGATTTAGTCTCTAAGACGCCAGAGGTA
GTTCTTAATAGACGTGATGAAAATGGTGAATTTGTTACCTTACGGATTCGATTTGCTTTGAACCGTCGTGAAAGTGGTTT
TATTTCCGGTTTAGTTGCAGTATCACACGATGCTACTGAGCAAGAGAAAGAAGAGCGTGAAAGAAGACTTTTTGTATCTA
ATGTTTCTCATGAACTTCGTACACCTTTGACATCTGTAAAATCTTATTTAGAAGCTTTAGATGAGGGAGCGCTCAATGAA
GAAGTTGCTCCAAGCTTCATTAAGGTATCTCTAGATGAAACAAATCGTATGATGCGTATGATATCAGATTTATTAAGTTT
ATCGCGCATTGATAATGAAGTAACGCATTTAGATGTTGAAATGACGAATTTTACAGCTTTCATGACCTCAATTTTGAATC
GATTTGACCAGATTAGAAATCAAAAAACAGTCACAGGAAAAGTTTATGAAATTGTCAGAGATTATCCTCTTAAGTCAATT
TGGGTGGAAATTGATACAGATAAGATGACTCAAGTGATTGATAACATTTTAAATAATGCAGTCAAGTATTCACCAGATGG
TGGTAAGATTACAGTTAATCTACGCACAACTAAAACGCAGATGATTTTATCAATATCAGACCAAGGCTTAGGTATTCCCA
AAAAAGATTTACCTCTCATCTTTGATCGTTTTTATCGTGTTGATAAGGCGAGAAGTCGTCAACAGGGTGGAACTGGACTT
GGTTTGTCAATTGCAAAAGAAATTGTTAAGCAGCATAAGGGATTTATTTGGGCTAAGAGTGAGTATGGTAAAGGGTCTAC
TTTTACAATCGTCTTGCCTTATGATAAAGATGCTGTAACTTATGAAGAATGGGAGGACGTTGAAGATTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(325-435)

PAS fold (PAS)

(94-180)

His Kinase A (phospho-acceptor) domain (HisKA)

(208-272)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicK Streptococcus mutans UA159

74.818

91.982

0.688
  micB Streptococcus pneumoniae Cp1015

67.436

96.437

0.65

Multiple sequence alignment