Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   QOR45_RS03910 Genome accession   NZ_OX460935
Coordinates   717470..718279 (+) Length   269 a.a.
NCBI ID   WP_001289498.1    Uniprot ID   X5KFV3
Organism   Streptococcus agalactiae isolate MRI Z2-286     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 712470..723279
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QOR45_RS03885 - 712799..713494 (-) 696 WP_000173639.1 amino acid ABC transporter permease -
  QOR45_RS03890 - 713507..714307 (-) 801 WP_000946171.1 transporter substrate-binding domain-containing protein -
  QOR45_RS03895 - 714319..715074 (-) 756 WP_000053150.1 amino acid ABC transporter ATP-binding protein -
  QOR45_RS03900 vicR 715414..716124 (+) 711 WP_000722052.1 response regulator YycF Regulator
  QOR45_RS03905 vicK 716117..717466 (+) 1350 WP_001065467.1 cell wall metabolism sensor histidine kinase VicK Regulator
  QOR45_RS03910 vicX 717470..718279 (+) 810 WP_001289498.1 MBL fold metallo-hydrolase Regulator
  QOR45_RS03915 - 718282..718648 (+) 367 Protein_691 YbaN family protein -
  QOR45_RS03920 rnc 718824..719510 (+) 687 WP_000661525.1 ribonuclease III -
  QOR45_RS03925 smc 719518..723057 (+) 3540 WP_283572111.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30273.24 Da        Isoelectric Point: 6.2265

>NTDB_id=1158983 QOR45_RS03910 WP_001289498.1 717470..718279(+) (vicX) [Streptococcus agalactiae isolate MRI Z2-286]
MSEIGFKYSILASGSTGNCFYIETPQKRLLIDAGLTGKKVTSLLAEINRKPEDLDAILVTHEHSDHIKGVGVLARKYHLD
IYANEQTWKVMDERNMLGKVDVSQKHVFGRGKTLTFGDLDIESFGVSHDAVDPQFYRMMKDDKSFVMLTDTGYVSDRMAS
LIENADGYLIESNHDIEILRSGSYPWTLKQRILSDKGHLSNEDGSETMIRTIGNRTKHIYLGHLSKENNIKELAHMTMEN
NLMRADFGVGTDFSVHDTSPDSATPLTRI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1158983 QOR45_RS03910 WP_001289498.1 717470..718279(+) (vicX) [Streptococcus agalactiae isolate MRI Z2-286]
ATGTCAGAAATAGGATTTAAATATAGTATCTTAGCTTCAGGTTCAACTGGAAATTGTTTTTATATTGAGACACCCCAAAA
ACGTCTTTTAATTGATGCTGGTTTAACAGGCAAGAAAGTGACTAGCCTTCTTGCAGAAATTAATCGTAAGCCAGAAGATT
TAGATGCTATACTAGTTACCCACGAACATTCTGACCACATTAAAGGTGTTGGCGTATTGGCTAGGAAATATCACCTTGAT
ATTTATGCCAATGAGCAGACGTGGAAAGTTATGGATGAGCGTAACATGTTAGGTAAAGTTGATGTTAGTCAAAAGCATGT
TTTTGGACGCGGTAAAACCTTAACTTTCGGGGATTTAGATATTGAGAGCTTTGGTGTAAGTCATGATGCTGTGGATCCCC
AATTTTACCGTATGATGAAAGATGATAAGAGCTTTGTGATGTTGACAGATACAGGATATGTTAGCGACCGAATGGCAAGC
TTGATTGAGAATGCAGATGGTTATTTGATCGAGTCAAATCACGACATTGAGATTCTACGTTCGGGTTCTTATCCTTGGAC
ACTTAAGCAACGTATTTTATCAGATAAAGGACATTTATCTAATGAAGATGGTTCAGAAACCATGATTCGCACTATAGGTA
ACCGTACTAAACACATCTATTTAGGACACTTGAGTAAGGAAAATAATATTAAGGAACTTGCTCACATGACTATGGAAAAC
AATTTAATGAGGGCTGACTTTGGTGTGGGCACAGATTTTTCTGTTCACGATACTTCACCTGATTCAGCTACCCCACTGAC
GAGGATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB X5KFV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.58

100

0.766

Multiple sequence alignment