Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   P6S15_RS14970 Genome accession   NZ_OX443570
Coordinates   2955405..2956682 (+) Length   425 a.a.
NCBI ID   WP_318766002.1    Uniprot ID   -
Organism   Lactiplantibacillus carotarum strain AMBF275     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 2950405..2961682
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P6S15_RS14940 (P6S16_RS15025) tsf 2950507..2951385 (+) 879 WP_318765999.1 translation elongation factor Ts -
  P6S15_RS14945 (P6S16_RS15030) pyrH 2951555..2952271 (+) 717 Protein_2902 UMP kinase -
  P6S15_RS14950 (P6S16_RS15035) frr 2952320..2952841 (+) 522 WP_318767693.1 ribosome recycling factor -
  P6S15_RS14955 (P6S16_RS15040) - 2952906..2953535 (-) 630 WP_318766000.1 hypothetical protein -
  P6S15_RS14960 (P6S16_RS15045) - 2953875..2954562 (+) 688 Protein_2905 isoprenyl transferase -
  P6S15_RS14965 (P6S16_RS15050) - 2954578..2955363 (+) 786 WP_318766001.1 phosphatidate cytidylyltransferase -
  P6S15_RS14970 (P6S16_RS15055) eeP 2955405..2956682 (+) 1278 WP_318766002.1 RIP metalloprotease RseP Regulator
  P6S15_RS14975 (P6S16_RS15060) - 2956723..2958432 (+) 1710 WP_318766003.1 proline--tRNA ligase -

Sequence


Protein


Download         Length: 425 a.a.        Molecular weight: 46020.48 Da        Isoelectric Point: 9.0415

>NTDB_id=1158415 P6S15_RS14970 WP_318766002.1 2955405..2956682(+) (eeP) [Lactiplantibacillus carotarum strain AMBF275]
MIVTIITFIIVFGILVIVHEFGHFYFAKKAGILVREFSVGMGPKAVAFRRNATTYTLRFLPIGGYVRMAGVADDEDEELK
PGTPVSLMLGDDGLVHSINASKKTTLFNGIPLSVTATDLEKELWIEGYENGDESELKRYQVDHDATIVESDGTEVQIAPV
DVQFQSAKLWQRMLTNFAGPMNNFILAIITFAILAFMQGGVTSVTTNVAATTANSVAREAGIQKGDQITAVNGKKMTSAQ
SISILIQDSPKQKLDLTVKRGGQTKTIAVTPAAKTVSGNRIGQIGVQWDTKTDTSFGAKLAYGFTGSWGITKQIFQVLGR
MVTHGFSLNDLGGPVAIFATTSQAAKSGLRQVIYLLAVLSINLGIVNLLPIPALDGGKLLLNIVEGIRGKPLRVETESVI
TLIGFGLLMLLMILVTWNDIQRYFF

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=1158415 P6S15_RS14970 WP_318766002.1 2955405..2956682(+) (eeP) [Lactiplantibacillus carotarum strain AMBF275]
TTGATAGTTACGATTATTACGTTTATCATCGTGTTCGGGATTTTAGTCATCGTACACGAATTTGGCCATTTTTACTTTGC
CAAAAAGGCGGGTATCCTGGTACGGGAATTTTCCGTCGGGATGGGTCCCAAAGCGGTTGCCTTTCGTCGTAATGCAACGA
CTTATACGCTACGGTTCTTGCCAATTGGTGGGTACGTGCGGATGGCCGGGGTTGCGGATGATGAGGATGAAGAGTTAAAA
CCGGGGACACCGGTCAGCCTAATGTTGGGCGATGATGGCCTGGTCCACTCAATTAATGCCAGTAAAAAAACAACCCTGTT
TAACGGGATTCCCTTGTCGGTCACGGCGACTGACCTTGAAAAGGAACTCTGGATCGAAGGGTATGAAAATGGCGATGAAA
GCGAACTGAAACGTTACCAAGTCGATCATGATGCAACCATCGTGGAAAGTGACGGGACTGAAGTTCAAATTGCACCGGTT
GACGTCCAGTTCCAATCAGCTAAATTATGGCAGCGGATGTTAACCAACTTTGCCGGGCCAATGAATAACTTTATCCTGGC
CATCATTACCTTTGCGATTCTGGCTTTCATGCAGGGCGGAGTGACGTCGGTCACCACGAACGTGGCGGCAACGACGGCGA
ATTCCGTTGCCCGTGAGGCGGGCATTCAAAAGGGTGACCAAATTACCGCGGTTAACGGTAAAAAGATGACCAGTGCCCAG
TCGATCTCGATATTGATTCAAGACAGTCCGAAACAAAAACTGGATCTGACGGTCAAACGGGGTGGTCAAACCAAGACCAT
CGCGGTAACGCCGGCGGCCAAAACGGTTTCGGGTAATCGCATCGGTCAAATCGGGGTTCAGTGGGATACCAAAACGGATA
CCAGTTTCGGTGCTAAGTTAGCGTACGGATTTACGGGTTCGTGGGGTATTACCAAACAAATTTTCCAAGTATTGGGACGG
ATGGTAACGCACGGCTTTAGCCTGAACGATTTGGGCGGTCCCGTGGCAATTTTTGCCACCACTTCACAAGCCGCGAAATC
GGGGCTACGCCAAGTCATTTACCTGTTGGCCGTGCTTTCAATCAACTTGGGAATTGTGAACCTATTACCAATTCCAGCCC
TCGATGGTGGTAAACTATTATTGAACATCGTTGAGGGTATTCGCGGTAAGCCACTGCGGGTCGAAACGGAAAGTGTCATC
ACTCTGATTGGCTTTGGCTTATTAATGTTATTAATGATTTTAGTCACTTGGAACGATATTCAACGTTATTTCTTCTAA

Domains


Predicted by InterproScan.

(7-411)

(212-260)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

49.652

100

0.504

  eeP Streptococcus thermophilus LMG 18311

49.533

100

0.499


Multiple sequence alignment