Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   KJP56_RS20710 Genome accession   NZ_OX419652
Coordinates   3884718..3884837 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis isolate NRS6131     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3879718..3889837
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP56_RS20685 (NRS6131_20480) albG 3879882..3880583 (+) 702 WP_014481222.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  KJP56_RS20690 (NRS6131_20485) ywhL 3880589..3881965 (-) 1377 WP_213419409.1 YncE family protein -
  KJP56_RS20695 (NRS6131_20490) ywhK 3882004..3883359 (-) 1356 WP_015250986.1 YncE family protein -
  KJP56_RS20700 - 3883462..3883617 (-) 156 WP_195880381.1 hypothetical protein -
  KJP56_RS20705 (NRS6131_20495) rapF 3883589..3884734 (+) 1146 WP_213419410.1 tetratricopeptide repeat protein Regulator
  KJP56_RS20710 (NRS6131_20500) phrF 3884718..3884837 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  KJP56_RS20715 ywhH 3884952..3885411 (+) 460 Protein_4025 YbaK/EbsC family protein -
  KJP56_RS20720 (NRS6131_20505) speB 3885442..3886314 (-) 873 WP_003227545.1 agmatinase -
  KJP56_RS20725 (NRS6131_20510) speE 3886375..3887205 (-) 831 WP_116315745.1 spermidine synthase -
  KJP56_RS20730 (NRS6131_20515) pbpG 3887407..3889482 (+) 2076 WP_015384942.1 transglycosylase domain-containing protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=1158104 KJP56_RS20710 WP_009968329.1 3884718..3884837(+) (phrF) [Bacillus subtilis isolate NRS6131]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=1158104 KJP56_RS20710 WP_009968329.1 3884718..3884837(+) (phrF) [Bacillus subtilis isolate NRS6131]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment