Detailed information NTG1158103

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: KJP56_RS20705
• Genome accession: NZ_OX419652
• Coordinates: 3883589..3884734 (+)
• Length: 381 a.a.
• NCBI ID: WP_213419410.1
• Uniprot ID: -
• Organism: Bacillus subtilis isolate NRS6131
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3878589..3889734

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KJP56_RS20680 (NRS6131_20475)	albF	3878605..3879885 (+)	1281	WP_003227558.1	pitrilysin family protein	-
KJP56_RS20685 (NRS6131_20480)	albG	3879882..3880583 (+)	702	WP_014481222.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
KJP56_RS20690 (NRS6131_20485)	ywhL	3880589..3881965 (-)	1377	WP_213419409.1	YncE family protein	-
KJP56_RS20695 (NRS6131_20490)	ywhK	3882004..3883359 (-)	1356	WP_015250986.1	YncE family protein	-
KJP56_RS20700	-	3883462..3883617 (-)	156	WP_195880381.1	hypothetical protein	-
KJP56_RS20705 (NRS6131_20495)	rapF	3883589..3884734 (+)	1146	WP_213419410.1	tetratricopeptide repeat protein	Regulator
KJP56_RS20710 (NRS6131_20500)	phrF	3884718..3884837 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
KJP56_RS20715	ywhH	3884952..3885411 (+)	460	Protein_4025	YbaK/EbsC family protein	-
KJP56_RS20720 (NRS6131_20505)	speB	3885442..3886314 (-)	873	WP_003227545.1	agmatinase	-
KJP56_RS20725 (NRS6131_20510)	speE	3886375..3887205 (-)	831	WP_116315745.1	spermidine synthase	-
KJP56_RS20730 (NRS6131_20515)	pbpG	3887407..3889482 (+)	2076	WP_015384942.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45613.10 Da
• Isoelectric Point: 5.1503

>NTDB_id=1158103 KJP56_RS20705 WP_213419410.1 3883589..3884734(+) (rapF) [Bacillus subtilis isolate NRS6131]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAVSHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=1158103 KJP56_RS20705 WP_213419410.1 3883589..3884734(+) (rapF) [Bacillus subtilis isolate NRS6131]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGATCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCGTCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	99.475	100	0.995
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572