Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   KJP56_RS02530 Genome accession   NZ_OX419652
Coordinates   478349..479299 (+) Length   316 a.a.
NCBI ID   WP_015382768.1    Uniprot ID   -
Organism   Bacillus subtilis isolate NRS6131     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 473349..484299
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP56_RS02505 (NRS6131_02520) rapC 474809..475957 (+) 1149 WP_014475800.1 response regulator aspartate phosphatase RapC Regulator
  KJP56_RS02510 (NRS6131_02525) phrC 475941..476063 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  KJP56_RS02515 (NRS6131_02530) yczM 476163..476252 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  KJP56_RS02520 (NRS6131_02535) yczN 476334..476447 (-) 114 WP_032678937.1 YjcZ family sporulation protein -
  KJP56_RS02525 (NRS6131_02540) thrD 476600..477964 (-) 1365 WP_072173982.1 aspartate kinase -
  KJP56_RS02530 (NRS6131_02545) ceuB 478349..479299 (+) 951 WP_015382768.1 petrobactin ABC transporter permease YclN Machinery gene
  KJP56_RS02535 (NRS6131_02550) yclO 479292..480239 (+) 948 WP_014475805.1 petrobactin ABC transporter permease YclO -
  KJP56_RS02540 (NRS6131_02555) yclP 480233..480991 (+) 759 WP_014475806.1 petrobactin ABC transporter ATP-binding protein YclP -
  KJP56_RS02545 (NRS6131_02560) yclQ 481013..481966 (+) 954 WP_014478834.1 petrobactin ABC transporter substrate-binding protein YclQ -
  KJP56_RS02550 (NRS6131_02565) ycnB 482013..483431 (-) 1419 WP_014478836.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34885.30 Da        Isoelectric Point: 9.9364

>NTDB_id=1158040 KJP56_RS02530 WP_015382768.1 478349..479299(+) (ceuB) [Bacillus subtilis isolate NRS6131]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLIAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=1158040 KJP56_RS02530 WP_015382768.1 478349..479299(+) (ceuB) [Bacillus subtilis isolate NRS6131]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCTCGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCGGCCAGTCCTTTAATCAAAATGCT
GATCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TGAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCCCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCGGTGTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.848

100

0.528

Multiple sequence alignment