Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | KJP43_RS13275 | Genome accession | NZ_OX419579 |
| Coordinates | 2545276..2545611 (+) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus subtilis isolate NRS6103 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2540276..2550611
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KJP43_RS13255 (NRS6103_13140) | gcvT | 2540869..2541957 (-) | 1089 | WP_015714248.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| KJP43_RS13260 (NRS6103_13145) | yqhH | 2542398..2544071 (+) | 1674 | WP_029726726.1 | SNF2-related protein | - |
| KJP43_RS13265 (NRS6103_13150) | yqhG | 2544092..2544886 (+) | 795 | WP_015714249.1 | YqhG family protein | - |
| KJP43_RS13270 (NRS6103_13155) | sinI | 2545069..2545242 (+) | 174 | WP_003230187.1 | anti-repressor SinI family protein | Regulator |
| KJP43_RS13275 (NRS6103_13160) | sinR | 2545276..2545611 (+) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| KJP43_RS13280 (NRS6103_13165) | tasA | 2545704..2546489 (-) | 786 | WP_014664586.1 | biofilm matrix protein TasA | - |
| KJP43_RS13285 (NRS6103_13170) | sipW | 2546553..2547125 (-) | 573 | WP_072692741.1 | signal peptidase I | - |
| KJP43_RS13290 (NRS6103_13175) | tapA | 2547109..2547870 (-) | 762 | WP_029726724.1 | amyloid fiber anchoring/assembly protein TapA | - |
| KJP43_RS13295 (NRS6103_13180) | yqzG | 2548142..2548468 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| KJP43_RS13300 (NRS6103_13185) | spoIIT | 2548510..2548689 (-) | 180 | WP_029726723.1 | YqzE family protein | - |
| KJP43_RS13305 (NRS6103_13190) | comGG | 2548761..2549135 (-) | 375 | WP_029726722.1 | ComG operon protein ComGG | Machinery gene |
| KJP43_RS13310 | comGF | 2549136..2549519 (-) | 384 | WP_029726721.1 | ComG operon protein ComGF | Machinery gene |
| KJP43_RS13315 (NRS6103_13200) | comGE | 2549545..2549892 (-) | 348 | WP_014480255.1 | ComG operon protein 5 | Machinery gene |
| KJP43_RS13320 (NRS6103_13205) | comGD | 2549876..2550307 (-) | 432 | WP_029726720.1 | comG operon protein ComGD | Machinery gene |
| KJP43_RS13325 (NRS6103_13210) | comGC | 2550297..2550593 (-) | 297 | WP_029726719.1 | comG operon protein ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=1157905 KJP43_RS13275 WP_003226345.1 2545276..2545611(+) (sinR) [Bacillus subtilis isolate NRS6103]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=1157905 KJP43_RS13275 WP_003226345.1 2545276..2545611(+) (sinR) [Bacillus subtilis isolate NRS6103]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |