Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | KJP45_RS12265 | Genome accession | NZ_OX419578 |
| Coordinates | 2393587..2394624 (-) | Length | 345 a.a. |
| NCBI ID | WP_213414619.1 | Uniprot ID | - |
| Organism | Bacillus subtilis isolate NRS6128 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2388587..2399624
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KJP45_RS12215 (NRS6128_12120) | tasA | 2388685..2389470 (-) | 786 | WP_003230183.1 | biofilm matrix protein TasA | - |
| KJP45_RS12220 (NRS6128_12125) | sipW | 2389534..2390106 (-) | 573 | WP_003230181.1 | signal peptidase I | - |
| KJP45_RS12225 (NRS6128_12130) | tapA | 2390090..2390851 (-) | 762 | WP_029726724.1 | amyloid fiber anchoring/assembly protein TapA | - |
| KJP45_RS12230 (NRS6128_12135) | yqzG | 2391123..2391449 (+) | 327 | WP_029317915.1 | YqzG/YhdC family protein | - |
| KJP45_RS12235 (NRS6128_12140) | spoIIT | 2391491..2391670 (-) | 180 | WP_213414620.1 | YqzE family protein | - |
| KJP45_RS12240 (NRS6128_12145) | comGG | 2391741..2392115 (-) | 375 | WP_014480253.1 | ComG operon protein ComGG | Machinery gene |
| KJP45_RS12245 | comGF | 2392116..2392499 (-) | 384 | WP_080529536.1 | ComG operon protein ComGF | Machinery gene |
| KJP45_RS12250 (NRS6128_12155) | comGE | 2392525..2392872 (-) | 348 | WP_080529537.1 | ComG operon protein 5 | Machinery gene |
| KJP45_RS12255 (NRS6128_12160) | comGD | 2392856..2393287 (-) | 432 | WP_080529538.1 | comG operon protein ComGD | Machinery gene |
| KJP45_RS12260 (NRS6128_12165) | comGC | 2393277..2393573 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| KJP45_RS12265 (NRS6128_12170) | comGB | 2393587..2394624 (-) | 1038 | WP_213414619.1 | comG operon protein ComGB | Machinery gene |
| KJP45_RS12270 (NRS6128_12175) | comGA | 2394611..2395681 (-) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| KJP45_RS12275 (NRS6128_12180) | - | 2395893..2396090 (-) | 198 | WP_213414618.1 | hypothetical protein | - |
| KJP45_RS12280 (NRS6128_12185) | corA | 2396092..2397045 (-) | 954 | WP_004399136.1 | magnesium transporter CorA | - |
| KJP45_RS12285 (NRS6128_12190) | yqhB | 2397188..2398513 (+) | 1326 | WP_213414617.1 | hemolysin family protein | - |
| KJP45_RS12290 (NRS6128_12195) | rsbRD | 2398570..2399406 (-) | 837 | WP_021480027.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39745.27 Da Isoelectric Point: 9.7900
>NTDB_id=1157833 KJP45_RS12265 WP_213414619.1 2393587..2394624(-) (comGB) [Bacillus subtilis isolate NRS6128]
MKKIRKVWLLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGKSIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWLLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGKSIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=1157833 KJP45_RS12265 WP_213414619.1 2393587..2394624(-) (comGB) [Bacillus subtilis isolate NRS6128]
ATGAAAAAGATTAGAAAAGTCTGGTTGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACACTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTAAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTTGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACACTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTAAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.381 |
93.623 |
0.93 |