Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   KJP47_RS17085 Genome accession   NZ_OX419577
Coordinates   3169642..3171951 (-) Length   769 a.a.
NCBI ID   WP_213382590.1    Uniprot ID   -
Organism   Bacillus subtilis isolate NRS6120     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3164642..3176951
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP47_RS17045 (NRS6120_17590) mrpB 3165109..3165540 (+) 432 WP_213382585.1 Na(+)/H(+) antiporter subunit B -
  KJP47_RS17050 (NRS6120_17595) mrpC 3165540..3165881 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  KJP47_RS17055 (NRS6120_17600) mrpD 3165874..3167355 (+) 1482 WP_213382587.1 Na+/H+ antiporter subunit D -
  KJP47_RS17060 (NRS6120_17605) mrpE 3167361..3167837 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  KJP47_RS17065 (NRS6120_17610) mrpF 3167837..3168121 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  KJP47_RS17070 (NRS6120_17615) mnhG 3168105..3168479 (+) 375 WP_213382589.1 monovalent cation/H(+) antiporter subunit G -
  KJP47_RS17075 (NRS6120_17620) yuxO 3168518..3168898 (-) 381 WP_071579112.1 hotdog fold thioesterase -
  KJP47_RS17080 (NRS6120_17625) comA 3168917..3169561 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  KJP47_RS17085 (NRS6120_17630) comP 3169642..3171951 (-) 2310 WP_213382590.1 histidine kinase Regulator
  KJP47_RS17090 (NRS6120_17635) comX 3171970..3172137 (-) 168 WP_041057586.1 competence pheromone ComX Regulator
  KJP47_RS17095 (NRS6120_17640) comQ 3172125..3173024 (-) 900 WP_038828674.1 class 1 isoprenoid biosynthesis enzyme Regulator
  KJP47_RS17100 (NRS6120_17645) degQ 3173209..3173349 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  KJP47_RS17105 - 3173571..3173696 (+) 126 WP_003228793.1 hypothetical protein -
  KJP47_RS17110 (NRS6120_17650) - 3173810..3174178 (+) 369 WP_014477834.1 hypothetical protein -
  KJP47_RS17115 (NRS6120_17655) pdeH 3174154..3175383 (-) 1230 WP_041057592.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 769 a.a.        Molecular weight: 89255.71 Da        Isoelectric Point: 8.0517

>NTDB_id=1157769 KJP47_RS17085 WP_213382590.1 3169642..3171951(-) (comP) [Bacillus subtilis isolate NRS6120]
MKNLMKKFTIAVIVLSILYISYTTYISMNGIIIGTKVQKNDKSQFVIEEISKSSYGQFVGLRQGDIILKINEEKPSDKHL
KWGYLSHINSLDILRSGKKIHLKDFDLVTLNRSYSFFLFVLPLVFYFLSIICIFYIFKVNKKRRSFAAYILILLLLDISI
AYISAGGPFRGHIINRYINLFTFISSPILYLQFIQTYLGEIGKTFLNRISFLYIIPIFNLGIEFFQDYLQVDIDFLATVN
LVSFAILTLFSFSAIYFHLNKYKYAEHSFILKLLILTNTLSFAPFLIFFVLPIIFTGNYIFPALASASLLVLIPFGLVYQ
FVANKMFDIEFILGRMRYYALLAMIPTLLIVGALVLFDVMEIQMNPLRQTVFFFVVMFAVFYLKEVIDFKFRLKRFSEKF
NYQDSIFKYTQLMRGVTSLQQVFKELKNTILDVLLVSKAYTFEVTPDHKVIFLDKHEIGPDWHFYQEEFENVTSEIGKII
EVNQGFLMKVGERGGSSYVLLCLSNINTPRLTRDEISWLKTLSFYTSVSMENVMHIEELMEHLKDLKQEGTNPIWLKKLM
FAIEEKQRSGLARDLHDSVLQDLISLKRQCELFLGDFKKDDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYD
LGLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDDG
VGFDQEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2310 bp        

>NTDB_id=1157769 KJP47_RS17085 WP_213382590.1 3169642..3171951(-) (comP) [Bacillus subtilis isolate NRS6120]
TTGAAGAACTTGATGAAAAAATTCACAATAGCTGTAATTGTTTTGAGTATCCTCTATATAAGCTATACAACTTATATTAG
TATGAATGGGATTATTATTGGGACTAAGGTTCAAAAAAATGATAAAAGTCAATTTGTAATAGAAGAAATATCAAAATCTT
CATATGGACAATTTGTTGGTCTGAGACAGGGAGATATCATATTAAAAATCAATGAAGAAAAACCTTCAGACAAACATTTG
AAATGGGGATATTTGAGTCATATTAACAGTTTGGATATTTTAAGAAGTGGAAAAAAGATTCATCTCAAAGATTTTGATTT
AGTTACTCTAAATAGATCTTATAGTTTTTTTCTGTTCGTACTTCCTTTGGTTTTTTACTTTTTAAGCATAATATGCATTT
TTTATATATTTAAGGTAAATAAAAAAAGGAGATCATTTGCTGCCTATATTCTTATTCTATTGTTATTAGACATTTCGATA
GCATATATAAGTGCAGGTGGACCATTTAGAGGACATATAATCAATCGGTATATTAACTTGTTTACTTTTATATCTTCTCC
TATTCTTTATCTTCAATTTATACAAACATACCTTGGAGAAATAGGAAAAACTTTTTTGAATAGAATCTCCTTTCTTTATA
TCATACCAATATTTAATCTTGGAATTGAGTTTTTTCAAGACTATTTACAAGTAGATATTGATTTTTTAGCGACTGTTAAC
TTGGTTTCTTTTGCAATTTTGACTCTATTTTCTTTTTCAGCGATATATTTTCATCTTAATAAATATAAATATGCTGAGCA
TTCGTTTATTCTTAAATTACTAATTTTAACAAATACTTTATCATTTGCGCCTTTTTTGATATTTTTTGTTCTTCCAATAA
TATTTACAGGTAATTATATTTTCCCGGCATTAGCTTCGGCGTCATTACTAGTACTAATTCCGTTCGGGTTAGTATACCAA
TTTGTAGCCAATAAGATGTTTGATATAGAGTTTATCTTAGGAAGAATGAGATACTATGCTCTACTTGCCATGATACCAAC
TCTTCTTATAGTTGGTGCATTAGTTCTGTTTGATGTAATGGAAATACAGATGAATCCTTTACGCCAAACGGTATTTTTTT
TCGTTGTCATGTTCGCTGTCTTTTATCTTAAAGAGGTCATAGATTTTAAATTTCGGTTAAAACGTTTCTCTGAAAAATTC
AACTATCAGGACAGTATCTTTAAATATACTCAGCTAATGAGGGGGGTAACTTCTCTCCAACAAGTCTTTAAAGAACTGAA
AAATACTATTTTGGATGTTTTACTTGTAAGCAAAGCTTATACCTTTGAGGTTACTCCTGATCACAAAGTGATATTTTTAG
ATAAGCATGAAATTGGACCGGACTGGCATTTTTATCAAGAGGAATTTGAAAACGTAACTTCAGAAATCGGGAAAATTATT
GAAGTCAATCAGGGTTTTCTTATGAAAGTTGGTGAACGAGGCGGAAGTTCTTATGTTCTGCTTTGTTTATCTAATATTAA
CACTCCTCGGCTAACACGGGATGAGATATCATGGTTGAAAACACTGTCTTTCTATACAAGTGTGTCCATGGAAAATGTCA
TGCATATTGAGGAGCTCATGGAACATTTGAAGGACTTAAAACAAGAGGGAACCAACCCCATCTGGCTGAAAAAGCTAATG
TTTGCAATCGAAGAAAAACAGCGTTCAGGACTCGCCCGCGATCTCCACGATTCCGTTCTTCAGGATTTGATTTCATTAAA
ACGCCAGTGTGAGCTGTTTCTGGGTGATTTCAAGAAGGATGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTGTGC
AGATGAATGAGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGACCGCAGCTTCTGTATGAT
CTTGGATTGGTGAAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGTTTAAATACCGG
GAGATTTACGGCTTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGGTTA
AGCACTCTCAGGCGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATTGTTCTTCATTATGAGGATGATGGC
GTAGGGTTTGATCAAGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGCTTT
AGATGGGCGCCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

97.399

100

0.974


Multiple sequence alignment