Detailed information    

insolico Bioinformatically predicted

Overview


Name   degS   Type   Regulator
Locus tag   KJP77_RS19260 Genome accession   NZ_OX419554
Coordinates   3664926..3666083 (-) Length   385 a.a.
NCBI ID   WP_003227983.1    Uniprot ID   A0A199WDV9
Organism   Bacillus subtilis isolate NRS6160     
Function   phosphorylation of DegU (predicted from homology)   
Competence regulation

Genomic Context


Location: 3659926..3671083
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP77_RS19230 (NRS6160_19010) yvyF 3660179..3660598 (-) 420 WP_003227995.1 TIGR03826 family flagellar region protein -
  KJP77_RS19235 (NRS6160_19015) comFC 3660672..3661394 (-) 723 WP_038427947.1 comF operon protein ComFC Machinery gene
  KJP77_RS19240 (NRS6160_19020) comFB 3661358..3661654 (-) 297 WP_015483764.1 late competence protein ComFB -
  KJP77_RS19245 (NRS6160_19025) comFA 3661714..3663105 (-) 1392 WP_088467416.1 ATP-dependent helicase ComFA Machinery gene
  KJP77_RS19250 (NRS6160_19030) fakBA 3663211..3664056 (-) 846 WP_003244125.1 DegV family protein -
  KJP77_RS19255 (NRS6160_19035) degU 3664154..3664843 (-) 690 WP_003219701.1 two-component system response regulator DegU Regulator
  KJP77_RS19260 (NRS6160_19040) degS 3664926..3666083 (-) 1158 WP_003227983.1 two-component sensor histidine kinase DegS Regulator
  KJP77_RS19265 (NRS6160_19045) yvyE 3666300..3666953 (+) 654 WP_003227979.1 YigZ family protein -
  KJP77_RS19270 (NRS6160_19050) tagV 3666953..3668128 (+) 1176 WP_088467417.1 polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagV -
  KJP77_RS19275 (NRS6160_19055) tagO 3668201..3669277 (-) 1077 WP_003227975.1 MraY family glycosyltransferase -
  KJP77_RS19280 (NRS6160_19060) tuaH 3669422..3670615 (-) 1194 WP_080015525.1 glycosyltransferase family 1 protein -

Sequence


Protein


Download         Length: 385 a.a.        Molecular weight: 44957.76 Da        Isoelectric Point: 6.2957

>NTDB_id=1156629 KJP77_RS19260 WP_003227983.1 3664926..3666083(-) (degS) [Bacillus subtilis isolate NRS6160]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGETEDQRLAPQFEVALFRLAQEAVSNALKHSESEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide


Download         Length: 1158 bp        

>NTDB_id=1156629 KJP77_RS19260 WP_003227983.1 3664926..3666083(-) (degS) [Bacillus subtilis isolate NRS6160]
ATGAATAAAACAAAGATGGATTCCAAAGTGCTGGATTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
CGAAGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTCGAAGAACTGAAACAAATTAAACAGCAGG
TGTATGAAGTGATTGAGCTTGGCGATAAACTTGAAGTGCAAACTCGCCATGCGAGAAACCGTTTATCCGAGGTCAGCCGT
AATTTTCATAGATTCAGTGAAGAGGAAATCCGCAATGCTTATGAAAAAGCCCATAAGCTGCAGGTAGAATTGACGATGAT
CCAGCAGCGTGAGAAGCAATTGCGCGAACGGCGGGACGATTTGGAGCGCAGATTGCTAGGGCTTCAGGAAATCATTGAGC
GGTCAGAATCATTAGTAAGCCAAATTACAGTTGTGCTCAACTACTTGAATCAGGATTTGCGCGAAGTTGGACTGCTTCTT
GCTGATGCTCAGGCAAAACAGGATTTCGGCTTAAGAATCATTGAGGCGCAGGAAGAAGAGAGAAAAAGAGTCTCAAGAGA
AATCCATGACGGACCCGCTCAAATGCTGGCGAATGTTATGATGAGATCGGAATTAATCGAGCGGATTTTCCGTGACCGGG
GCGCAGAGGACGGATTCCAAGAAATTAAAAATCTACGCCAAAATGTTCGGAATGCCCTTTACGAAGTGAGAAGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTAAGAAAATATCTATATACAACCGAGGAATA
TAACGGGAAGGTCAAAATACATTTTCAGTGCATTGGAGAAACAGAGGATCAGAGGCTAGCGCCTCAGTTTGAGGTTGCGC
TCTTCAGGCTCGCACAGGAAGCTGTGTCTAATGCGCTAAAGCATTCTGAATCTGAAGAAATTACAGTCAAAGTTGAGATC
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGTAAAGGGTTCGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTGGGCATGAAAGAAAGAGTAGATTTATTGGAAGGAACGATGACAATAGATTCGAAAATAGGTCTTG
GGACATTTATTATGATTAAGGTTCCGTTATCTCTTTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A199WDV9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degS Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment