Detailed information NTG1156611

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: KJP77_RS13880
• Genome accession: NZ_OX419554
• Coordinates: 2639110..2639727 (-)
• Length: 205 a.a.
• NCBI ID: WP_088467267.1
• Uniprot ID: -
• Organism: Bacillus subtilis isolate NRS6160
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2634110..2644727

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KJP77_RS13850 (NRS6160_13710)	rpsT	2634412..2634678 (+)	267	WP_003229989.1	30S ribosomal protein S20	-
KJP77_RS13855 (NRS6160_13715)	holA	2634693..2635736 (-)	1044	WP_003229987.1	DNA polymerase III subunit delta	-
KJP77_RS13860	-	2635776..2635925 (-)	150	WP_003229985.1	hypothetical protein	-
KJP77_RS13865 (NRS6160_13720)	yqzM	2635966..2636100 (+)	135	WP_003229983.1	YqzM family protein	-
KJP77_RS13870 (NRS6160_13725)	comEC	2636140..2638470 (-)	2331	WP_032677118.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
KJP77_RS13875 (NRS6160_13730)	comEB	2638474..2639043 (-)	570	WP_003229978.1	ComE operon protein 2	-
KJP77_RS13880 (NRS6160_13735)	comEA	2639110..2639727 (-)	618	WP_088467267.1	competence protein ComEA	Machinery gene
KJP77_RS13885 (NRS6160_13740)	comER	2639811..2640632 (+)	822	WP_004398597.1	late competence protein ComER	-
KJP77_RS13890 (NRS6160_13745)	yqeM	2640698..2641441 (-)	744	WP_015384134.1	class I SAM-dependent methyltransferase	-
KJP77_RS13895 (NRS6160_13750)	rsfS	2641438..2641794 (-)	357	WP_014477391.1	ribosome silencing factor	-
KJP77_RS13900 (NRS6160_13755)	yqeK	2641812..2642372 (-)	561	WP_014480316.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
KJP77_RS13905 (NRS6160_13760)	nadD	2642362..2642931 (-)	570	WP_004398676.1	nicotinate-nucleotide adenylyltransferase	-
KJP77_RS13910 (NRS6160_13765)	yhbY	2642943..2643233 (-)	291	WP_003226133.1	ribosome assembly RNA-binding protein YhbY	-
KJP77_RS13915 (NRS6160_13770)	aroE	2643227..2644069 (-)	843	WP_088467268.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 205 a.a.
• Molecular weight: 21840.58 Da
• Isoelectric Point: 4.8354

>NTDB_id=1156611 KJP77_RS13880 WP_088467267.1 2639110..2639727(-) (comEA) [Bacillus subtilis isolate NRS6160]
MNWLNQHKKAIILAASAAVFTAIMIFLATGKNKEPVKQAVPTETENTVVKQEANNDESSETIVIDIKGAVRHPGVYEMRT
GDRVSQAIEKAGGTSEQADEAQVNLAEILQDGTVVYIPKKGEETAVQQGTGGSVQSDGGKGPLVNINTATLEELQGISGV
GPSKAEAIIAYREENGRFQTIEDITKVSGIGEKSFEKIKSSITVK

Nucleotide

• Length: 618 bp

>NTDB_id=1156611 KJP77_RS13880 WP_088467267.1 2639110..2639727(-) (comEA) [Bacillus subtilis isolate NRS6160]
ATGAATTGGTTGAATCAGCATAAGAAAGCAATTATTTTAGCGGCTTCTGCGGCTGTTTTCACAGCGATTATGATCTTTCT
GGCCACAGGGAAAAATAAAGAGCCGGTGAAGCAAGCTGTACCAACAGAGACAGAAAATACAGTGGTAAAGCAGGAAGCAA
ACAACGACGAGTCAAGTGAAACAATTGTGATAGACATCAAAGGTGCTGTTCGGCATCCTGGCGTTTATGAAATGCGAACA
GGGGACAGAGTATCTCAGGCAATTGAGAAAGCGGGCGGGACCAGTGAACAAGCAGACGAAGCGCAAGTAAATTTGGCGGA
GATTCTGCAGGACGGGACAGTGGTGTACATCCCGAAAAAGGGAGAGGAAACAGCAGTGCAGCAAGGTACCGGAGGGTCTG
TCCAAAGCGATGGAGGGAAGGGGCCGCTGGTGAATATCAATACAGCAACCTTAGAGGAGTTACAAGGCATCTCAGGGGTG
GGGCCATCCAAAGCTGAAGCTATTATTGCATACCGGGAAGAAAACGGGCGTTTCCAAACAATTGAAGATATCACTAAGGT
TTCAGGAATAGGTGAAAAGTCATTTGAGAAAATAAAGTCTTCCATTACAGTAAAGTGA

Domains

Predicted by InterproScan.

• SLBB domain (SLBB) (63-118)

• Helix-hairpin-helix motif (HHH_3) (142-203)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	98.049	100	0.98
comEA	Staphylococcus aureus MW2	36.818	100	0.395
comEA	Staphylococcus aureus N315	36.364	100	0.39