Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | KJP77_RS13375 | Genome accession | NZ_OX419554 |
| Coordinates | 2552293..2552628 (+) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus subtilis isolate NRS6160 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2547293..2557628
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KJP77_RS13355 (NRS6160_13205) | gcvT | 2547885..2548973 (-) | 1089 | WP_015714248.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| KJP77_RS13360 (NRS6160_13210) | yqhH | 2549415..2551088 (+) | 1674 | WP_003230203.1 | SNF2-related protein | - |
| KJP77_RS13365 (NRS6160_13215) | yqhG | 2551109..2551903 (+) | 795 | WP_015714249.1 | YqhG family protein | - |
| KJP77_RS13370 (NRS6160_13220) | sinI | 2552086..2552259 (+) | 174 | WP_003230187.1 | anti-repressor SinI family protein | Regulator |
| KJP77_RS13375 (NRS6160_13225) | sinR | 2552293..2552628 (+) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| KJP77_RS13380 (NRS6160_13230) | tasA | 2552721..2553506 (-) | 786 | WP_015714250.1 | biofilm matrix protein TasA | - |
| KJP77_RS13385 (NRS6160_13235) | sipW | 2553570..2554142 (-) | 573 | WP_003230181.1 | signal peptidase I | - |
| KJP77_RS13390 (NRS6160_13240) | tapA | 2554126..2554887 (-) | 762 | WP_015714251.1 | amyloid fiber anchoring/assembly protein TapA | - |
| KJP77_RS13395 (NRS6160_13245) | yqzG | 2555157..2555483 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| KJP77_RS13400 (NRS6160_13250) | spoIIT | 2555525..2555704 (-) | 180 | WP_072175549.1 | YqzE family protein | - |
| KJP77_RS13405 (NRS6160_13255) | comGG | 2555775..2556149 (-) | 375 | WP_015714252.1 | ComG operon protein ComGG | Machinery gene |
| KJP77_RS13410 | comGF | 2556150..2556533 (-) | 384 | WP_038429292.1 | ComG operon protein ComGF | Machinery gene |
| KJP77_RS13415 (NRS6160_13265) | comGE | 2556559..2556906 (-) | 348 | WP_015714254.1 | ComG operon protein 5 | Machinery gene |
| KJP77_RS13420 (NRS6160_13270) | comGD | 2556890..2557321 (-) | 432 | WP_015714255.1 | comG operon protein ComGD | Machinery gene |
| KJP77_RS13425 (NRS6160_13275) | comGC | 2557311..2557607 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=1156600 KJP77_RS13375 WP_003226345.1 2552293..2552628(+) (sinR) [Bacillus subtilis isolate NRS6160]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=1156600 KJP77_RS13375 WP_003226345.1 2552293..2552628(+) (sinR) [Bacillus subtilis isolate NRS6160]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |