Detailed information NTG1155543

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: QNH71_RS09490
• Genome accession: NZ_OX352941
• Coordinates: 1926742..1927176 (+)
• Length: 144 a.a.
• NCBI ID: WP_011922561.1
• Uniprot ID: -
• Organism: Streptococcus suis isolate 861160_WT
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1921742..1932176

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QNH71_RS09455	-	1922491..1922856 (+)	366	WP_002936568.1	DUF1033 family protein	-
QNH71_RS09460	-	1922891..1923834 (-)	944	Protein_1822	S66 peptidase family protein	-
QNH71_RS09465	comYA	1923920..1924870 (+)	951	WP_011921718.1	competence type IV pilus ATPase ComGA	Machinery gene
QNH71_RS09470	comYB	1924782..1925819 (+)	1038	WP_255304289.1	competence type IV pilus assembly protein ComGB	Machinery gene
QNH71_RS09475	comYC	1925821..1926102 (+)	282	WP_011921720.1	competence type IV pilus major pilin ComGC	Machinery gene
QNH71_RS09480	comGD	1926083..1926490 (+)	408	WP_011921721.1	competence type IV pilus minor pilin ComGD	-
QNH71_RS09485	comYE	1926462..1926755 (+)	294	WP_011921722.1	competence type IV pilus minor pilin ComGE	Machinery gene
QNH71_RS09490	comGF/cglF	1926742..1927176 (+)	435	WP_011922561.1	competence type IV pilus minor pilin ComGF	Machinery gene
QNH71_RS09495	comGG	1927154..1927564 (+)	411	WP_011921724.1	competence type IV pilus minor pilin ComGG	-
QNH71_RS09500	comYH	1927621..1928574 (+)	954	WP_024406069.1	class I SAM-dependent methyltransferase	Machinery gene
QNH71_RS09505	-	1928624..1929811 (+)	1188	WP_012775473.1	acetate kinase	-
QNH71_RS09510	-	1930125..1930676 (+)	552	WP_012775474.1	folate family ECF transporter S component	-
QNH71_RS09515	-	1930732..1931988 (+)	1257	WP_012775475.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16491.85 Da
• Isoelectric Point: 5.9234

>NTDB_id=1155543 QNH71_RS09490 WP_011922561.1 1926742..1927176(+) (comGF/cglF) [Streptococcus suis isolate 861160_WT]
MLKSKIPAFTLLECLVVLVILSGSLLIFEGLSKLLVQEAHYQGQTVQKEWLVFSSQLRSEWDQAELVKVENGKVYVNKGE
QALAFGKSWSDDFRKTNDRGQGYQPMLYQVDSAAISQENQLVRIDFSFKNGEERTFIYAFKEKS

Nucleotide

• Length: 435 bp

>NTDB_id=1155543 QNH71_RS09490 WP_011922561.1 1926742..1927176(+) (comGF/cglF) [Streptococcus suis isolate 861160_WT]
TTGTTAAAAAGTAAAATTCCTGCTTTTACACTCTTGGAATGTTTGGTGGTTCTAGTCATTCTGTCAGGTAGCCTCTTGAT
TTTTGAAGGCTTATCCAAATTACTAGTCCAGGAAGCGCATTATCAAGGTCAGACCGTTCAAAAGGAATGGTTGGTCTTCT
CTAGCCAATTGCGGTCGGAGTGGGACCAGGCTGAATTGGTCAAGGTTGAAAATGGCAAGGTCTATGTCAACAAAGGTGAA
CAGGCTTTGGCCTTTGGCAAGTCATGGTCGGATGATTTTCGGAAAACAAATGATAGAGGCCAGGGTTACCAACCCATGCT
CTATCAGGTGGATAGCGCAGCCATTTCCCAAGAAAACCAGCTGGTGCGCATCGACTTTAGCTTTAAAAACGGAGAGGAGC
GAACCTTTATCTATGCTTTTAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (37-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae TIGR4	52.482	97.917	0.514
comGF/cglF	Streptococcus pneumoniae Rx1	52.482	97.917	0.514
comGF/cglF	Streptococcus pneumoniae D39	52.482	97.917	0.514
comGF/cglF	Streptococcus pneumoniae R6	52.482	97.917	0.514
comGF/cglF	Streptococcus mitis NCTC 12261	52.985	93.056	0.493
comYF	Streptococcus mutans UA140	48.611	100	0.486
comYF	Streptococcus mutans UA159	47.917	100	0.479
comGF/cglF	Streptococcus mitis SK321	50	93.056	0.465
comGF	Lactococcus lactis subsp. cremoris KW2	45.39	97.917	0.444