Detailed information NTG1155278

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: ONG87_RS05240
• Genome accession: NZ_OX352319
• Coordinates: 1171330..1173561 (+)
• Length: 743 a.a.
• NCBI ID: WP_264382344.1
• Uniprot ID: -
• Organism: Pseudomonas sp. MM227
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1166330..1178561

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ONG87_RS05215 (AHFPHNDE_01039)	minC	1166505..1167242 (-)	738	WP_264382342.1	septum site-determining protein MinC	-
ONG87_RS05220 (AHFPHNDE_01040)	-	1167382..1168311 (+)	930	WP_122479334.1	lipid A biosynthesis lauroyl acyltransferase	-
ONG87_RS05225 (AHFPHNDE_01041)	-	1168419..1169198 (-)	780	WP_122479333.1	VacJ family lipoprotein	-
ONG87_RS05230 (AHFPHNDE_01042)	-	1169191..1170489 (-)	1299	WP_122479332.1	serine/threonine protein kinase	-
ONG87_RS05235 (AHFPHNDE_01043)	-	1170670..1171182 (-)	513	WP_264382343.1	DUF2062 domain-containing protein	-
ONG87_RS05240 (AHFPHNDE_01044)	comA	1171330..1173561 (+)	2232	WP_264382344.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
ONG87_RS05245 (AHFPHNDE_01045)	exbB	1173642..1174277 (+)	636	WP_163007608.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
ONG87_RS05250 (AHFPHNDE_01046)	-	1174274..1174702 (+)	429	WP_122479328.1	biopolymer transporter ExbD	-
ONG87_RS05255 (AHFPHNDE_01047)	lpxK	1174702..1175697 (+)	996	WP_264382345.1	tetraacyldisaccharide 4'-kinase	-
ONG87_RS05260 (AHFPHNDE_01048)	-	1175723..1175908 (+)	186	WP_122479326.1	Trm112 family protein	-
ONG87_RS05265 (AHFPHNDE_01049)	kdsB	1175905..1176669 (+)	765	WP_264382346.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ONG87_RS05270 (AHFPHNDE_01050)	murB	1176705..1177727 (+)	1023	WP_264382347.1	UDP-N-acetylmuramate dehydrogenase	-
ONG87_RS05275 (AHFPHNDE_01051)	-	1177768..1178361 (+)	594	WP_264382348.1	nucleotidyltransferase family protein	-

Sequence

Protein

• Length: 743 a.a.
• Molecular weight: 79937.97 Da
• Isoelectric Point: 10.8242

>NTDB_id=1155278 ONG87_RS05240 WP_264382344.1 1171330..1173561(+) (comA) [Pseudomonas sp. MM227]
MRTAMLALATGMVCLRWLPTLPSLSWLVGMGAGAMLLLAARRWHCALVLLGLCWACLHAHWATNGQLVAALDGQTLWLEG
EVVGLPATNGSTVRFELAEAWSRRAQLPSRLRLAWYGGPRVVSGERWRLAVNLKRPRALVNPGGFDAQAWALAKGIGATG
SVKAGQRVRAARLAWRDGVRQRLLAVDSQQQGGTLAALLLGDGSGVSRQQWDVLQATGTVHLLVISGQHVGLLAGLLYGL
VALLAKLGVWPARWPWLPCACALAFTGALAYGLLAGFQVPVRRACIMIGLVLLWRLRFRHLGVWSPLLLAFTTVLLVDPL
VSLQPGFWLSFCAVGVLLLTFSGRLGGWRWWQAWTRAQCCVAVGLLPVMVALALPVSISGPLVNLLAVPWISLLVLPVAM
AGAVLLPVPWVGETLLWLAGGALRGLFQWLTWAAEWGPSWLPPGLSPGVWLVLVIGVLLLLLPAGTPLRWLGVPMVGLLL
FSPRQAPPVGQADIWVLDVGQGLGVLVRTAHHQLLYDTGPGLGEIDAGASVVVPSLVALGVRRLDAMIISHAHLDHSGGA
GTVMRRLPVDQTLAGEPDLLPAAWQAQPCEPGRSWEWDEVKFVLWRWPSAVPGNPASCVLWVEANGERLLLSGDIDAAAE
KALVASGLPVQAHWLQVPHHGSRTSSSKPLLDAVRPQAALISRGHGNTFGHPHASVLARFRALGIATHDTAEDGALRVRL
GTFGPVQRQRSQRRFWREAPDHP

Nucleotide

• Length: 2232 bp

>NTDB_id=1155278 ONG87_RS05240 WP_264382344.1 1171330..1173561(+) (comA) [Pseudomonas sp. MM227]
ATGCGCACAGCGATGTTGGCGTTGGCGACCGGGATGGTGTGTCTGCGTTGGCTGCCGACGCTTCCATCATTGAGCTGGCT
GGTAGGCATGGGTGCAGGTGCGATGTTGTTGCTGGCAGCGCGCCGCTGGCATTGCGCGCTCGTTCTGCTGGGCCTGTGTT
GGGCCTGTCTGCACGCCCACTGGGCGACGAACGGCCAGTTGGTGGCGGCGCTGGACGGACAAACCCTGTGGCTCGAAGGA
GAGGTGGTGGGCCTGCCGGCAACCAACGGCAGCACGGTGCGCTTCGAACTGGCCGAGGCCTGGTCGCGCCGTGCGCAGCT
ACCGTCGCGCCTGCGCCTGGCCTGGTATGGCGGCCCGCGGGTCGTCAGCGGCGAGCGTTGGCGGCTGGCCGTGAACCTCA
AGCGGCCGCGGGCATTGGTCAACCCCGGAGGTTTCGACGCCCAGGCCTGGGCCCTGGCCAAGGGCATCGGCGCCACCGGC
AGCGTCAAGGCCGGCCAGCGGGTGCGGGCGGCCCGTCTGGCCTGGCGCGATGGCGTGCGCCAGCGGCTGCTGGCTGTGGA
CAGCCAGCAGCAGGGCGGCACGCTCGCCGCCTTGCTGCTGGGCGACGGTTCGGGCGTGTCCCGCCAGCAGTGGGACGTTC
TCCAGGCCACGGGGACCGTGCATCTGTTGGTCATCTCAGGCCAGCACGTCGGCCTGCTTGCGGGGTTGCTGTATGGCCTG
GTTGCCCTGTTGGCAAAACTCGGTGTCTGGCCGGCGCGTTGGCCCTGGTTGCCCTGTGCCTGCGCATTGGCGTTCACCGG
CGCGTTGGCGTATGGGCTGTTGGCCGGCTTCCAGGTGCCGGTACGCCGAGCCTGCATCATGATCGGCCTGGTGCTGTTGT
GGCGGCTGCGCTTTCGCCACCTGGGCGTGTGGTCGCCGCTGCTGCTGGCATTCACCACGGTCTTGCTGGTCGACCCACTG
GTCAGCCTGCAGCCGGGATTCTGGCTGTCGTTTTGCGCGGTGGGAGTGCTGCTGCTGACGTTTTCCGGACGTCTGGGCGG
TTGGCGCTGGTGGCAGGCCTGGACGCGCGCGCAGTGCTGCGTGGCGGTCGGTTTGCTGCCGGTGATGGTGGCCCTGGCGT
TGCCGGTGAGTATCAGCGGGCCGCTGGTGAATCTGCTGGCCGTGCCCTGGATCAGTCTGCTGGTGCTGCCGGTGGCCATG
GCCGGTGCCGTGCTGCTGCCTGTGCCCTGGGTGGGCGAAACCCTGCTGTGGCTGGCCGGCGGCGCACTGCGCGGCCTGTT
TCAATGGCTGACCTGGGCCGCCGAGTGGGGGCCTTCCTGGCTGCCGCCGGGGCTGTCGCCCGGGGTATGGCTGGTGCTGG
TCATCGGCGTGCTGTTGCTGTTGCTGCCGGCCGGTACTCCATTGCGCTGGTTGGGCGTGCCGATGGTCGGGCTGCTGTTG
TTCAGCCCGCGTCAGGCACCGCCCGTGGGCCAGGCCGATATCTGGGTGCTGGATGTCGGCCAGGGGCTGGGTGTGCTCGT
GCGCACCGCCCACCACCAGTTGCTCTACGACACCGGTCCCGGCCTGGGCGAAATCGACGCCGGCGCCAGTGTGGTGGTGC
CCAGCCTGGTAGCCCTGGGCGTGCGGCGCCTGGATGCGATGATCATCAGTCATGCGCACCTCGATCATTCCGGTGGTGCC
GGCACCGTTATGCGACGCCTGCCGGTCGACCAGACGCTGGCCGGTGAGCCCGACCTTTTGCCCGCCGCGTGGCAGGCGCA
GCCTTGCGAGCCTGGGCGCAGTTGGGAGTGGGACGAGGTGAAGTTCGTCTTGTGGCGCTGGCCGTCGGCCGTGCCCGGCA
ATCCTGCCTCGTGCGTACTCTGGGTCGAAGCCAATGGCGAGCGCCTGCTGCTCAGCGGCGACATCGACGCGGCGGCCGAA
AAAGCCCTGGTCGCGAGCGGTTTGCCGGTTCAGGCACACTGGTTGCAGGTGCCGCACCACGGCAGCCGGACGTCATCGAG
CAAGCCATTGCTGGATGCAGTGCGTCCACAGGCAGCGTTGATCTCCAGGGGCCATGGCAATACCTTCGGCCATCCCCATG
CCTCCGTACTGGCGCGTTTTCGGGCATTGGGCATCGCCACCCACGACACCGCCGAGGACGGCGCGTTGCGTGTCCGCCTG
GGTACCTTTGGCCCGGTGCAGCGGCAGCGCTCCCAGCGACGTTTCTGGCGCGAGGCACCCGACCACCCCTGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (20-167)

• Competence protein (Competence) (198-462)

• Metallo-beta-lactamase superfamily (Lactamase_B) (499-685)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	58.971	96.77	0.571