Detailed information
Bioinformatically predicted
Overview
| Name | comE1/comEA | Type | Machinery gene |
| Locus tag | LSO74_RS09550 | Genome accession | NZ_OV040719 |
| Coordinates | 1900177..1900524 (-) | Length | 115 a.a. |
| NCBI ID | WP_005655981.1 | Uniprot ID | A0A0H3PPJ5 |
| Organism | Haemophilus influenzae strain 3655 isolate 3655 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1895177..1905524
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LSO74_RS09530 (KRLU3655_LOCUS1807) | bioB | 1895566..1896567 (-) | 1002 | WP_005655985.1 | biotin synthase BioB | - |
| LSO74_RS09535 (KRLU3655_LOCUS1808) | thiQ | 1896680..1897327 (-) | 648 | WP_005655984.1 | thiamine ABC transporter ATP-binding protein | - |
| LSO74_RS09540 (KRLU3655_LOCUS1809) | thiP | 1897311..1898927 (-) | 1617 | WP_005655983.1 | thiamine/thiamine pyrophosphate ABC transporter permease | - |
| LSO74_RS09545 (KRLU3655_LOCUS1810) | thiB | 1898932..1899930 (-) | 999 | WP_005655982.1 | thiamine ABC transporter substrate binding subunit | - |
| LSO74_RS09550 (KRLU3655_LOCUS1811) | comE1/comEA | 1900177..1900524 (-) | 348 | WP_005655981.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| LSO74_RS09555 (KRLU3655_LOCUS1812) | ispH | 1900693..1901637 (-) | 945 | WP_005651634.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| LSO74_RS09560 (KRLU3655_LOCUS1813) | lspA | 1901634..1902149 (-) | 516 | WP_005655980.1 | signal peptidase II | - |
| LSO74_RS09565 (KRLU3655_LOCUS1814) | - | 1902219..1903778 (-) | 1560 | WP_032821875.1 | phosphoethanolamine transferase | - |
Sequence
Protein
Download Length: 115 a.a. Molecular weight: 12369.19 Da Isoelectric Point: 8.0085
>NTDB_id=1151783 LSO74_RS09550 WP_005655981.1 1900177..1900524(-) (comE1/comEA) [Haemophilus influenzae strain 3655 isolate 3655]
MKLMKTLFTSIVLCGALVVSSSFAEEKATEQTAQSVVTTQAEAQVAPAVVSDKLNINTATASEIQKSLTGIGAKKAEAIV
QYREKHGNFTNAEQLLEVQGIGKATLEKNRDRIIF
MKLMKTLFTSIVLCGALVVSSSFAEEKATEQTAQSVVTTQAEAQVAPAVVSDKLNINTATASEIQKSLTGIGAKKAEAIV
QYREKHGNFTNAEQLLEVQGIGKATLEKNRDRIIF
Nucleotide
Download Length: 348 bp
>NTDB_id=1151783 LSO74_RS09550 WP_005655981.1 1900177..1900524(-) (comE1/comEA) [Haemophilus influenzae strain 3655 isolate 3655]
ATGAAATTAATGAAAACATTATTCACTTCGATTGTATTGTGTGGTGCACTGGTTGTTTCTTCGTCTTTTGCTGAGGAAAA
AGCGACAGAACAAACCGCTCAATCTGTTGTAACAACTCAAGCTGAAGCTCAAGTAGCACCAGCCGTAGTGAGCGATAAAT
TGAATATCAACACAGCAACTGCCAGTGAAATTCAAAAATCCCTAACTGGCATTGGTGCGAAAAAAGCGGAAGCTATTGTG
CAATATCGTGAAAAACACGGTAATTTTACTAATGCAGAACAGCTTTTAGAAGTACAAGGAATTGGCAAAGCAACACTAGA
GAAAAATCGTGATCGTATAATCTTTTAA
ATGAAATTAATGAAAACATTATTCACTTCGATTGTATTGTGTGGTGCACTGGTTGTTTCTTCGTCTTTTGCTGAGGAAAA
AGCGACAGAACAAACCGCTCAATCTGTTGTAACAACTCAAGCTGAAGCTCAAGTAGCACCAGCCGTAGTGAGCGATAAAT
TGAATATCAACACAGCAACTGCCAGTGAAATTCAAAAATCCCTAACTGGCATTGGTGCGAAAAAAGCGGAAGCTATTGTG
CAATATCGTGAAAAACACGGTAATTTTACTAATGCAGAACAGCTTTTAGAAGTACAAGGAATTGGCAAAGCAACACTAGA
GAAAAATCGTGATCGTATAATCTTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE1/comEA | Haemophilus influenzae Rd KW20 |
97.321 |
97.391 |
0.948 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
58.261 |
100 |
0.583 |
| comEA | Vibrio campbellii strain DS40M4 |
39.286 |
97.391 |
0.383 |