Detailed information
Bioinformatically predicted
Overview
| Name | qstR | Type | Regulator |
| Locus tag | HUW69_RS12145 | Genome accession | NZ_LT992490 |
| Coordinates | 2707416..2708060 (+) | Length | 214 a.a. |
| NCBI ID | WP_001188318.1 | Uniprot ID | A0A085QXE6 |
| Organism | Vibrio cholerae strain 4295STDY6534200 | ||
| Function | promote expression of competence genes (predicted from homology) Competence regulation |
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Genomic Context
Location: 2702416..2713060
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUW69_RS12130 (SAMEA4374365_02469) | - | 2703003..2704442 (-) | 1440 | WP_174566588.1 | PilN domain-containing protein | - |
| HUW69_RS12135 (SAMEA4374365_02470) | csrD | 2704455..2706467 (-) | 2013 | WP_174566589.1 | RNase E specificity factor CsrD | - |
| HUW69_RS12140 (SAMEA4374365_02471) | ssb | 2706591..2707124 (-) | 534 | WP_000168289.1 | single-stranded DNA-binding protein | Machinery gene |
| HUW69_RS12145 (SAMEA4374365_02472) | qstR | 2707416..2708060 (+) | 645 | WP_001188318.1 | LuxR C-terminal-related transcriptional regulator | Regulator |
| HUW69_RS12150 (SAMEA4374365_02473) | galU | 2708233..2709105 (+) | 873 | WP_001924593.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| HUW69_RS12155 (SAMEA4374365_02474) | uvrA | 2709261..2712083 (+) | 2823 | WP_000357692.1 | excinuclease ABC subunit UvrA | - |
Sequence
Protein
Download Length: 214 a.a. Molecular weight: 24722.55 Da Isoelectric Point: 9.6461
>NTDB_id=1150289 HUW69_RS12145 WP_001188318.1 2707416..2708060(+) (qstR) [Vibrio cholerae strain 4295STDY6534200]
MQRANYARTIYLLTTQPKTLHPGVQAAIEQLNLPVPVIEPERLLREYQSDKHKILLLDHAENGLIRQQLGPLKLTSPYFE
TILFNVEKRLRTEDLLTFGNLKGLFYANEDTGFIAHGLGEIINGQNWLPRHVSSQLLHYYRYAFQSHQVQATVDLTAREI
QILRCLQTGASNMQIAENLFISEFTVKSHLYQIFKKLNVKNRVKAIAWVNQNLL
MQRANYARTIYLLTTQPKTLHPGVQAAIEQLNLPVPVIEPERLLREYQSDKHKILLLDHAENGLIRQQLGPLKLTSPYFE
TILFNVEKRLRTEDLLTFGNLKGLFYANEDTGFIAHGLGEIINGQNWLPRHVSSQLLHYYRYAFQSHQVQATVDLTAREI
QILRCLQTGASNMQIAENLFISEFTVKSHLYQIFKKLNVKNRVKAIAWVNQNLL
Nucleotide
Download Length: 645 bp
>NTDB_id=1150289 HUW69_RS12145 WP_001188318.1 2707416..2708060(+) (qstR) [Vibrio cholerae strain 4295STDY6534200]
ATGCAACGAGCCAACTATGCACGCACGATTTATTTATTAACGACACAGCCGAAAACGTTACATCCCGGAGTTCAAGCCGC
CATTGAGCAATTGAACCTGCCCGTCCCGGTGATTGAACCAGAACGCTTATTGCGCGAGTATCAATCCGATAAACACAAAA
TATTGTTGCTCGACCATGCGGAAAATGGCCTGATTCGCCAGCAATTGGGTCCCCTAAAGCTTACCAGCCCGTACTTCGAA
ACCATCTTGTTTAATGTCGAGAAACGGTTAAGAACAGAAGATCTGCTCACTTTTGGCAACCTCAAAGGTCTGTTTTATGC
CAATGAAGACACAGGCTTTATTGCCCACGGTCTTGGGGAGATCATTAATGGCCAAAACTGGCTACCTCGCCATGTCAGCA
GTCAGTTGCTGCATTACTATCGTTACGCTTTCCAAAGCCATCAAGTTCAAGCCACGGTAGATTTGACTGCACGTGAAATT
CAGATCCTGCGCTGTTTACAAACTGGCGCATCGAATATGCAAATCGCTGAGAATTTATTTATTAGTGAGTTCACGGTGAA
ATCGCATCTTTATCAGATATTTAAAAAGCTAAACGTGAAAAATCGAGTCAAAGCGATCGCTTGGGTTAATCAAAATTTAC
TGTAA
ATGCAACGAGCCAACTATGCACGCACGATTTATTTATTAACGACACAGCCGAAAACGTTACATCCCGGAGTTCAAGCCGC
CATTGAGCAATTGAACCTGCCCGTCCCGGTGATTGAACCAGAACGCTTATTGCGCGAGTATCAATCCGATAAACACAAAA
TATTGTTGCTCGACCATGCGGAAAATGGCCTGATTCGCCAGCAATTGGGTCCCCTAAAGCTTACCAGCCCGTACTTCGAA
ACCATCTTGTTTAATGTCGAGAAACGGTTAAGAACAGAAGATCTGCTCACTTTTGGCAACCTCAAAGGTCTGTTTTATGC
CAATGAAGACACAGGCTTTATTGCCCACGGTCTTGGGGAGATCATTAATGGCCAAAACTGGCTACCTCGCCATGTCAGCA
GTCAGTTGCTGCATTACTATCGTTACGCTTTCCAAAGCCATCAAGTTCAAGCCACGGTAGATTTGACTGCACGTGAAATT
CAGATCCTGCGCTGTTTACAAACTGGCGCATCGAATATGCAAATCGCTGAGAATTTATTTATTAGTGAGTTCACGGTGAA
ATCGCATCTTTATCAGATATTTAAAAAGCTAAACGTGAAAAATCGAGTCAAAGCGATCGCTTGGGTTAATCAAAATTTAC
TGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| qstR | Vibrio cholerae strain A1552 |
98.598 |
100 |
0.986 |
| qstR | Vibrio campbellii strain DS40M4 |
52.336 |
100 |
0.523 |
| qstR | Vibrio parahaemolyticus RIMD 2210633 |
51.628 |
100 |
0.519 |