Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | HUW69_RS01455 | Genome accession | NZ_LT992490 |
| Coordinates | 323536..324054 (+) | Length | 172 a.a. |
| NCBI ID | WP_029627683.1 | Uniprot ID | A0A5C9T6F9 |
| Organism | Vibrio cholerae strain 4295STDY6534200 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 318536..329054
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUW69_RS01435 (SAMEA4374365_00296) | - | 318753..321230 (-) | 2478 | WP_029627686.1 | penicillin-binding protein 1A | - |
| HUW69_RS01440 (SAMEA4374365_00297) | pilM | 321373..322389 (+) | 1017 | WP_029627685.1 | type IV pilus assembly protein PilM | Machinery gene |
| HUW69_RS01445 (SAMEA4374365_00298) | pilN | 322379..322963 (+) | 585 | WP_029627684.1 | PilN domain-containing protein | Machinery gene |
| HUW69_RS01450 (SAMEA4374365_00299) | pilO | 322956..323546 (+) | 591 | WP_000157690.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| HUW69_RS01455 (SAMEA4374365_00300) | pilP | 323536..324054 (+) | 519 | WP_029627683.1 | pilus assembly protein PilP | Machinery gene |
| HUW69_RS01460 (SAMEA4374365_00301) | pilQ | 324080..325795 (+) | 1716 | WP_032480167.1 | type IV pilus secretin PilQ | Machinery gene |
| HUW69_RS01465 (SAMEA4374365_00302) | aroK | 325982..326506 (+) | 525 | WP_000818615.1 | shikimate kinase AroK | - |
| HUW69_RS01470 (SAMEA4374365_00303) | aroB | 326534..327619 (+) | 1086 | WP_000439813.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 172 a.a. Molecular weight: 19116.34 Da Isoelectric Point: 10.1807
>NTDB_id=1150260 HUW69_RS01455 WP_029627683.1 323536..324054(+) (pilP) [Vibrio cholerae strain 4295STDY6534200]
MKNKPLGLWLMSLLVLVGCKANQEDLTSYVAQVEREARKEVTKLKPILEFEATAYKQHKGREPFVLPKEALVQNQPLAKA
DCWQPLPRAKNGPLERYPLHQLRLKGVMSSGGSISALVQTPAGSVVKVKTGQYVGINNGKVTRVDDNYLLINETLPDGLG
CWNQRNVKLALK
MKNKPLGLWLMSLLVLVGCKANQEDLTSYVAQVEREARKEVTKLKPILEFEATAYKQHKGREPFVLPKEALVQNQPLAKA
DCWQPLPRAKNGPLERYPLHQLRLKGVMSSGGSISALVQTPAGSVVKVKTGQYVGINNGKVTRVDDNYLLINETLPDGLG
CWNQRNVKLALK
Nucleotide
Download Length: 519 bp
>NTDB_id=1150260 HUW69_RS01455 WP_029627683.1 323536..324054(+) (pilP) [Vibrio cholerae strain 4295STDY6534200]
ATGAAAAATAAGCCGCTTGGATTATGGCTGATGAGTTTGCTGGTGTTGGTTGGGTGTAAGGCGAACCAGGAAGATTTGAC
CTCATACGTCGCGCAAGTTGAGCGTGAAGCGCGCAAAGAAGTGACTAAGCTCAAGCCCATTTTAGAGTTTGAAGCCACGG
CCTATAAGCAGCACAAGGGGCGTGAGCCATTTGTCTTACCGAAAGAAGCGTTAGTGCAAAACCAACCGCTGGCGAAAGCG
GACTGTTGGCAACCCTTGCCACGTGCGAAAAATGGGCCGTTGGAGCGTTACCCATTGCACCAATTGCGCTTAAAAGGGGT
GATGAGCAGCGGGGGCAGTATCTCTGCCTTAGTGCAAACGCCGGCAGGGAGTGTGGTCAAGGTTAAGACAGGACAGTATG
TTGGAATCAATAATGGCAAAGTCACCCGAGTCGACGACAACTATTTGTTAATTAATGAAACTTTGCCTGATGGCTTAGGG
TGTTGGAATCAGCGTAACGTCAAGCTGGCTTTAAAATAA
ATGAAAAATAAGCCGCTTGGATTATGGCTGATGAGTTTGCTGGTGTTGGTTGGGTGTAAGGCGAACCAGGAAGATTTGAC
CTCATACGTCGCGCAAGTTGAGCGTGAAGCGCGCAAAGAAGTGACTAAGCTCAAGCCCATTTTAGAGTTTGAAGCCACGG
CCTATAAGCAGCACAAGGGGCGTGAGCCATTTGTCTTACCGAAAGAAGCGTTAGTGCAAAACCAACCGCTGGCGAAAGCG
GACTGTTGGCAACCCTTGCCACGTGCGAAAAATGGGCCGTTGGAGCGTTACCCATTGCACCAATTGCGCTTAAAAGGGGT
GATGAGCAGCGGGGGCAGTATCTCTGCCTTAGTGCAAACGCCGGCAGGGAGTGTGGTCAAGGTTAAGACAGGACAGTATG
TTGGAATCAATAATGGCAAAGTCACCCGAGTCGACGACAACTATTTGTTAATTAATGAAACTTTGCCTGATGGCTTAGGG
TGTTGGAATCAGCGTAACGTCAAGCTGGCTTTAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Vibrio cholerae strain A1552 |
97.093 |
100 |
0.971 |
| pilP | Vibrio campbellii strain DS40M4 |
56.977 |
100 |
0.57 |