Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   CKV85_RS03575 Genome accession   NZ_LT906454
Coordinates   745747..746748 (+) Length   333 a.a.
NCBI ID   WP_095122111.1    Uniprot ID   -
Organism   Streptococcus acidominimus strain NCTC11291     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 740747..751748
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CKV85_RS03565 (SAMEA4504048_00753) - 742302..744236 (+) 1935 WP_095122107.1 AlwI family type II restriction endonuclease -
  CKV85_RS03570 (SAMEA4504048_00754) - 744469..745554 (-) 1086 WP_095122109.1 M24 family metallopeptidase -
  CKV85_RS03575 (SAMEA4504048_00755) ccpA 745747..746748 (+) 1002 WP_095122111.1 catabolite control protein A Regulator
  CKV85_RS03580 (SAMEA4504048_00756) - 746844..748295 (+) 1452 WP_095122113.1 alpha-amylase -
  CKV85_RS03585 (SAMEA4504048_00757) - 748368..749366 (+) 999 WP_095122115.1 glycosyltransferase family 4 protein -
  CKV85_RS03590 (SAMEA4504048_00758) - 749368..750720 (+) 1353 WP_017770015.1 glycosyltransferase family 4 protein -
  CKV85_RS11675 - 751528..751689 (+) 162 WP_157737828.1 hypothetical protein -

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 36780.86 Da        Isoelectric Point: 5.3237

>NTDB_id=1147481 CKV85_RS03575 WP_095122111.1 745747..746748(+) (ccpA) [Streptococcus acidominimus strain NCTC11291]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRQKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNISNAYFA
FLAKGIDDIAEMYKYNIVLASSDEDEDKEVNVVNTLFAKQVDGIIFMGHRLTDKIRAEFSRSRTPVVLAGTIDLEHQLPS
VNIDYENAVEGVVSDLAKTHKKIAFVSGPLLDEINGKVRLAGYKAGLKANHLDYKEGLVFEAKYRYEDGFDLAERVINSG
ATAAYVGEDELAVGLLNGLFAAGKRVPEDFEIITSNDSEIVKYTRPNLSSINQPIYDLGAVAMRMLTKIMNKEELEEKEI
ILNHGVTKRASTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=1147481 CKV85_RS03575 WP_095122111.1 745747..746748(+) (ccpA) [Streptococcus acidominimus strain NCTC11291]
ATGAATACAGATGATACTATTACCATCTATGATGTTGCCAGGGAAGCTGGAGTGTCGATGGCAACCGTTAGTCGTGTTGT
CAACGGTAACAAAAACGTAAAAGAAAATACTCGTCAAAAGGTTCTTGAGGTTATCGATCGCTTAGATTACCGCCCAAATG
CTGTAGCGCGTGGTCTTGCCAGTAAAAAAACAACAACCGTTGGGGTTGTTATTCCAAATATCTCAAATGCTTATTTTGCA
TTTTTAGCTAAAGGGATTGACGATATTGCTGAGATGTACAAGTATAACATTGTTTTGGCATCAAGCGATGAGGATGAAGA
CAAAGAAGTTAACGTGGTTAATACCCTTTTTGCTAAGCAGGTTGATGGAATTATCTTCATGGGGCACCGCTTAACAGATA
AGATTCGCGCTGAATTCTCACGTTCACGTACGCCAGTTGTGCTTGCAGGAACTATTGATTTGGAACACCAATTGCCAAGC
GTTAACATTGATTATGAAAATGCAGTTGAGGGTGTTGTTTCAGACCTTGCTAAAACTCATAAAAAAATTGCCTTTGTATC
AGGTCCACTTCTTGATGAAATCAATGGTAAAGTACGTTTAGCAGGTTATAAGGCGGGTCTCAAAGCTAATCATCTTGACT
ATAAAGAAGGATTGGTATTTGAAGCCAAATACCGTTATGAAGATGGCTTTGATTTAGCGGAGCGTGTGATTAATTCGGGA
GCAACGGCAGCCTATGTTGGAGAAGATGAACTAGCTGTAGGCCTATTGAACGGTTTATTTGCAGCTGGTAAACGTGTTCC
AGAAGATTTTGAAATCATTACAAGTAATGATTCGGAAATTGTTAAATACACACGACCAAATTTATCATCCATTAACCAAC
CGATCTACGACTTAGGGGCAGTTGCTATGCGTATGTTGACTAAAATCATGAACAAAGAAGAATTGGAAGAAAAAGAAATT
ATTCTTAATCATGGCGTGACAAAACGGGCATCAACCAAATAG

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, lacI family (LacI)

(8-53)

Periplasmic binding protein-like domain (Peripla_BP_3)

(178-332)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

77.778

100

0.778
  ccpA Streptococcus pneumoniae D39

75.976

100

0.76
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

57.1

99.399

0.568

Multiple sequence alignment