Detailed information
Bioinformatically predicted
Overview
| Name | lpp1978 | Type | Machinery gene |
| Locus tag | BT137_RS09395 | Genome accession | NZ_LT632617 |
| Coordinates | 2052373..2052687 (-) | Length | 104 a.a. |
| NCBI ID | WP_011215961.1 | Uniprot ID | Q5WV44 |
| Organism | Legionella pneumophila strain ST42 isolate ST42 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2047373..2057687
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BT137_RS09365 (EUL120_01867) | - | 2047797..2048297 (-) | 501 | WP_027265083.1 | hypothetical protein | - |
| BT137_RS09375 (EUL120_01868) | - | 2048790..2049650 (+) | 861 | WP_027265082.1 | polysaccharide deacetylase family protein | - |
| BT137_RS09380 (EUL120_01869) | - | 2049768..2050964 (-) | 1197 | WP_027265081.1 | murein transglycosylase A | - |
| BT137_RS09385 (EUL120_01870) | lpp1976 | 2051074..2051631 (-) | 558 | WP_038838932.1 | hypothetical protein | Machinery gene |
| BT137_RS09390 (EUL120_01871) | lpp1977 | 2051628..2052434 (-) | 807 | WP_050566929.1 | PilW family protein | Machinery gene |
| BT137_RS09395 (EUL120_01872) | lpp1978 | 2052373..2052687 (-) | 315 | WP_011215961.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| BT137_RS09400 (EUL120_01873) | hisC | 2052847..2053956 (+) | 1110 | WP_038838933.1 | histidinol-phosphate transaminase | - |
| BT137_RS09405 (EUL120_01874) | - | 2053993..2054334 (+) | 342 | WP_011215963.1 | 4a-hydroxytetrahydrobiopterin dehydratase | - |
| BT137_RS09410 (EUL120_01875) | secF | 2054524..2055441 (-) | 918 | WP_010947716.1 | protein translocase subunit SecF | - |
| BT137_RS09415 (EUL120_01876) | secD | 2055454..2057310 (-) | 1857 | WP_010947717.1 | protein translocase subunit SecD | - |
| BT137_RS09420 (EUL120_01877) | yajC | 2057332..2057667 (-) | 336 | WP_010947718.1 | preprotein translocase subunit YajC | - |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 12327.37 Da Isoelectric Point: 8.4863
>NTDB_id=1145627 BT137_RS09395 WP_011215961.1 2052373..2052687(-) (lpp1978) [Legionella pneumophila strain ST42 isolate ST42]
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEAFYISENRLPLPPSNYHFDIRQSQK
KIILNVTWFKKSQSIIRSYELDAN
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEAFYISENRLPLPPSNYHFDIRQSQK
KIILNVTWFKKSQSIIRSYELDAN
Nucleotide
Download Length: 315 bp
>NTDB_id=1145627 BT137_RS09395 WP_011215961.1 2052373..2052687(-) (lpp1978) [Legionella pneumophila strain ST42 isolate ST42]
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTCG
ATGAAGCATTCTATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGCAATCTCAAAAG
AAAATCATTTTGAATGTTACATGGTTTAAAAAAAGCCAGTCCATTATTCGCTCCTATGAGCTGGATGCTAATTGA
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTCG
ATGAAGCATTCTATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGCAATCTCAAAAG
AAAATCATTTTGAATGTTACATGGTTTAAAAAAAGCCAGTCCATTATTCGCTCCTATGAGCTGGATGCTAATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lpp1978 | Legionella pneumophila strain ERS1305867 |
94.231 |
100 |
0.942 |
| lpp1978 | Legionella pneumophila str. Paris |
92.308 |
100 |
0.923 |