Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   STACADC2_RS03175 Genome accession   NZ_LT604076
Coordinates   587317..588318 (+) Length   333 a.a.
NCBI ID   WP_004197422.1    Uniprot ID   Q9L6X0
Organism   Streptococcus thermophilus strain ACA-DC     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 582317..593318
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STACADC2_RS03155 (STACADC2_0569) smpB 583422..583886 (+) 465 WP_002950240.1 SsrA-binding protein SmpB -
  STACADC2_RS03160 (STACADC2_0570) - 584040..585446 (+) 1407 WP_087009785.1 Cof-type HAD-IIB family hydrolase -
  STACADC2_RS03165 (STACADC2_0571) - 585448..585813 (+) 366 WP_002950243.1 S1 RNA-binding domain-containing protein -
  STACADC2_RS03170 (STACADC2_0572) - 585916..587001 (-) 1086 WP_011225703.1 M24 family metallopeptidase -
  STACADC2_RS03175 (STACADC2_0573) ccpA 587317..588318 (+) 1002 WP_004197422.1 catabolite control protein A Regulator
  STACADC2_RS03180 - 588377..588574 (+) 198 WP_014608125.1 hypothetical protein -
  STACADC2_RS03185 (STACADC2_0574) - 588680..589444 (+) 765 WP_087009786.1 MmcQ/YjbR family DNA-binding protein -
  STACADC2_RS03190 (STACADC2_0575) - 589459..590574 (+) 1116 WP_002950249.1 glycerate kinase -
  STACADC2_RS03195 (STACADC2_0576) - 590613..591068 (-) 456 WP_087009787.1 YueI family protein -
  STACADC2_RS03200 (STACADC2_0577) eno 591276..592580 (+) 1305 WP_011225708.1 surface-displayed alpha-enolase -
  STACADC2_RS03205 (STACADC2_0578) - 592734..592918 (-) 185 Protein_569 hypothetical protein -

Sequence


Protein


Download         Length: 333 a.a.        Molecular weight: 36597.53 Da        Isoelectric Point: 5.8841

>NTDB_id=1145082 STACADC2_RS03175 WP_004197422.1 587317..588318(+) (ccpA) [Streptococcus thermophilus strain ACA-DC]
MNTDETITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIVNSYFA
TLAKGIDDIATMYKYNIVLASSDDNEDHEVTVIHSLISKQVDGIIFMGHHLTEKIRAEFSRTRTPIVLAGTVDLEHQLPS
VNIDYKAAVEDCVTQLAKNNEKVAFVSGPLIDDINGKLRLAGYKSGLEKNNLSYNEGLVFEAKYSYKDGFELAQRVLNSG
ATAAYVGEDELAAGLLNGLFAAGKSVPEDFEIITSNDSPVTSYTRPNLSSINHPLYDLGAVSMRMLTKIMHKEELEDKDV
ILNHGLTLRQSTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=1145082 STACADC2_RS03175 WP_004197422.1 587317..588318(+) (ccpA) [Streptococcus thermophilus strain ACA-DC]
ATGAATACTGATGAAACAATCACAATTTATGATGTAGCTCGTGAAGCTGGAGTATCGATGGCAACTGTTTCTCGTGTTGT
AAATGGTAACAAAAACGTAAAAGAAAACACCCGAAAAAAAGTGCTCGAAGTCATTGATCGTTTGGATTACCGTCCAAATG
CGGTTGCGCGTGGCTTGGCGAGTAAAAAAACAACTACTGTAGGAGTTGTCATTCCAAATATTGTAAATAGCTATTTTGCT
ACTCTAGCTAAAGGTATTGATGACATTGCAACCATGTATAAGTATAATATTGTTCTTGCTTCCAGTGATGATAATGAGGA
TCATGAAGTTACAGTCATTCATTCTCTAATTTCTAAACAAGTTGATGGTATTATTTTTATGGGACACCATCTGACAGAAA
AAATCCGTGCAGAATTCTCTCGTACCCGTACACCGATTGTTCTAGCAGGAACAGTTGATCTCGAACACCAATTACCAAGT
GTTAACATCGACTATAAAGCTGCCGTTGAGGATTGTGTAACGCAACTTGCTAAAAATAATGAAAAGGTTGCCTTTGTATC
AGGACCACTAATTGATGATATTAATGGCAAACTACGTTTGGCTGGGTATAAGTCTGGACTTGAAAAGAATAATTTGAGCT
ACAACGAAGGACTTGTCTTTGAAGCTAAATATAGCTATAAAGACGGCTTTGAGTTAGCACAACGTGTCTTGAACTCTGGT
GCCACTGCTGCCTATGTTGGGGAAGATGAATTGGCTGCAGGTCTCTTGAATGGCCTCTTTGCTGCAGGCAAATCAGTTCC
AGAAGATTTCGAAATCATCACAAGCAATGATTCACCGGTTACAAGCTACACACGTCCAAACCTTTCTAGTATAAACCATC
CTCTCTATGATTTAGGGGCAGTTAGCATGCGTATGTTGACTAAAATTATGCATAAGGAAGAACTTGAAGATAAAGACGTT
ATTCTTAATCATGGTCTAACTTTACGCCAGTCAACAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q9L6X0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

76.276

100

0.763

  ccpA Streptococcus pneumoniae D39

75.375

100

0.754

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

54.985

99.399

0.547


Multiple sequence alignment