Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   AC2117_RS03335 Genome accession   NZ_LS999521
Coordinates   688314..692819 (+) Length   1501 a.a.
NCBI ID   WP_133971917.1    Uniprot ID   A0A446ZGC0
Organism   Acinetobacter calcoaceticus isolate Acinetobacter calcoaceticus str. 2117     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 683314..697819
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AC2117_RS03310 (AC2117_00658) - 683755..684390 (-) 636 WP_197730978.1 hypothetical protein -
  AC2117_RS03315 (AC2117_00659) pilG 684676..685059 (+) 384 WP_042897425.1 twitching motility response regulator PilG Regulator
  AC2117_RS03320 (AC2117_00660) - 685083..685445 (+) 363 WP_005036319.1 response regulator -
  AC2117_RS03325 (AC2117_00661) - 685505..686041 (+) 537 WP_005309806.1 chemotaxis protein CheW -
  AC2117_RS03330 (AC2117_00662) - 686084..688165 (+) 2082 WP_042897421.1 methyl-accepting chemotaxis protein -
  AC2117_RS03335 (AC2117_00663) chpA 688314..692819 (+) 4506 WP_133971917.1 Hpt domain-containing protein Regulator
  AC2117_RS03340 (AC2117_00664) - 692819..693286 (+) 468 WP_197730979.1 hypothetical protein -
  AC2117_RS03345 (AC2117_00665) dapE 693321..694457 (-) 1137 WP_133971919.1 succinyl-diaminopimelate desuccinylase -
  AC2117_RS03350 (AC2117_00666) - 694583..694726 (-) 144 WP_003655297.1 entericidin A/B family lipoprotein -
  AC2117_RS03355 (AC2117_00667) - 694849..695730 (-) 882 WP_133971921.1 DUF1853 family protein -
  AC2117_RS03360 (AC2117_00668) - 695834..696193 (+) 360 WP_133971922.1 YbaN family protein -
  AC2117_RS03365 (AC2117_00669) elsL 696352..696855 (+) 504 WP_133971924.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence


Protein


Download         Length: 1501 a.a.        Molecular weight: 171756.33 Da        Isoelectric Point: 4.4739

>NTDB_id=1143488 AC2117_RS03335 WP_133971917.1 688314..692819(+) (chpA) [Acinetobacter calcoaceticus isolate Acinetobacter calcoaceticus str. 2117]
MKEILKTLTEAMMLPEDSYSQQDAEFLEIFVEEIEEIFVELQSSIHEWMQSRNVATLTEIRRHFHTLKGSGRMIGAKSSA
ELAWTVEDTLNRVINESLRLTPNIQQYVQLVFKFYFFKLVDDFKSRKEHAVDFRPLILLGQQLQQQQSLEPALEELLLLW
DTLTAETKTGLEVNDLEPESDNLILETAIESEHNLAETLVLFMEEAEEHLATIDQFLEQEIHQHESYNALIRALHTLRGS
SAMAQVEAIFDASTKVEHLFKILLQEELSSHSKEIVLLRDYRQFIRNCLDLLAAHYSNEQLDSNLKQFNQVWDAYMEQHG
EHSSPLTPPHGLVSQLLQLDVSELLDAELDFEKGIRSEFPHYLERLSEQADLLLQHTQSQAMVGLYEYTNQLKDSYDMLL
DRPDLLQSDYVFEIYQKAHQQLIQLFDALAAGQRVSIIEQHQNILEELKLYTQHIPSLNSELLDIHQGVVESLFSVDVEQ
TANESSASIESVLTDHVAMSQSVHLDRQFMSTEHVNRYFDPELLDIFLEEADELLEGMDTDLNIWVNDQENFAALNNLMR
YLHTLKGGANMIQANYIGLIAHELESIYERIIQRQLVTSSALIDFIRLVQDDLADRLQIVREQHLDYAASHTIQALKSAG
TVYNLLGFAVKEMQAESETDVISESSFEVLQQEAIHNTALNLDELTSNFEQIVESNIRLVEHTELQVFDAEGYTDNIQDQ
DIDSVVEQTFMEEAAELLEMADHLLKQWFEQRTNRSILLQLQRAVHSLKGGSRMVGLETVQAIAYQLENAFEKFALYHFS
SNIYDNLLESAIVWLKEAIFKQNYQHFDGLQQSLENIQFIETAIQIPSKLTRTDLFSTEPVMSFVQGDGAEPPPMMGAWE
QAQHLEQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFGHTLVEMELAIQRLADQLRRMEGELESQIIAKHGIEH
SRYTEFDPLEMDQYSSLNQLSKSLAESASDLVDFKNTLSEKIRDTESLLVQQSRIQAEIQEGLMRTRLVPFSRLLPRLQR
IVRQTSTALDRPAELFVNNTEGELDRTMLERLVTPLEHMLRNAIDHGLEDRVQREQAQKPETGRIELNIHRQGTDIVVTF
KDDGRGIDIEKVRQKALLSGLIKSEQVLEHQDILQLIFHPGLSTADQVTQISGRGVGLDVVQSDIKALGGHVSVDSVYGQ
GTIFTIRVPTTVAVSDALMVKVADQQFAIPLAQIDRIVRVSPTSLEQYFGSAQEFFEFENKRYPLRYLSEFVGNQPIPRL
SGMMYSLPVLMIKTNNGQTIALLVDQLIGSRAQIVVKPIGQQFSSIGAIAGATILGDGQVCLILDGQNIARQIQSTRRHK
PLNEAIYRQRESDERRLIMIVDDSVTVRKVTTRLLERQGYDVVTAKDGIDAIEQLENIKPDLMLLDIEMPRMDGFEVLNL
VRHHDLHQDMPVIMITSRTGEKHRERAFTLGVNQYMGKPFQEEDLLHNIEAFFMTREEELA

Nucleotide


Download         Length: 4506 bp        

>NTDB_id=1143488 AC2117_RS03335 WP_133971917.1 688314..692819(+) (chpA) [Acinetobacter calcoaceticus isolate Acinetobacter calcoaceticus str. 2117]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGATGCTACCGGAAGATAGCTATTCTCAACAAGATGCCGAATTTCT
TGAAATCTTCGTTGAAGAAATTGAAGAAATTTTTGTTGAATTGCAATCTTCGATTCATGAATGGATGCAATCTAGAAATG
TTGCTACGCTGACTGAAATCCGTCGCCATTTTCATACCTTGAAAGGTTCTGGGCGAATGATTGGAGCTAAATCCTCCGCA
GAGCTTGCTTGGACTGTAGAAGATACGCTTAATCGGGTAATCAATGAGAGTCTCAGATTAACTCCTAACATCCAACAATA
TGTTCAGTTGGTATTTAAATTCTATTTCTTTAAATTAGTAGATGACTTTAAATCTAGAAAGGAACATGCAGTAGATTTTA
GACCTCTAATTTTATTGGGACAACAATTACAACAACAGCAAAGTTTAGAGCCTGCTTTAGAAGAACTTTTATTATTGTGG
GATACTCTTACTGCGGAAACGAAAACTGGTTTAGAGGTAAATGATTTAGAACCGGAATCAGATAATTTAATTCTAGAAAC
CGCTATAGAAAGTGAACATAACCTTGCTGAAACCTTAGTTTTATTTATGGAAGAAGCGGAAGAACACTTAGCGACTATCG
ATCAGTTTTTAGAACAAGAAATACATCAGCACGAGAGTTACAATGCGCTCATCCGTGCATTACATACGTTGCGCGGTAGC
TCGGCAATGGCTCAGGTAGAGGCAATTTTTGATGCCAGTACCAAGGTTGAGCATTTATTCAAAATCCTATTACAAGAAGA
GCTATCTTCTCATTCAAAAGAGATCGTGCTACTCCGTGATTACCGTCAGTTTATTCGAAATTGTTTAGATTTATTAGCTG
CGCATTACTCTAATGAGCAATTAGACTCTAACCTGAAACAATTCAATCAGGTTTGGGATGCTTATATGGAGCAGCATGGG
GAGCATTCGAGCCCACTCACGCCTCCACATGGTCTAGTATCTCAGCTGTTACAGCTTGATGTTTCAGAATTACTTGATGC
AGAGTTAGATTTTGAGAAAGGAATTCGTTCTGAGTTTCCTCACTATCTTGAGCGTTTAAGTGAACAAGCTGATTTGTTAT
TGCAACATACCCAGTCTCAGGCAATGGTTGGTTTATATGAATACACTAACCAGCTGAAAGATAGCTATGACATGTTGCTT
GATCGACCTGATTTATTACAATCAGATTATGTTTTTGAAATTTATCAAAAAGCACATCAACAATTAATTCAGTTATTTGA
TGCATTAGCTGCGGGTCAAAGAGTTAGTATTATTGAGCAACACCAAAATATTTTGGAAGAGCTAAAACTATATACCCAGC
ATATTCCAAGTCTTAATTCTGAACTATTAGACATTCATCAAGGAGTTGTTGAGTCGCTATTTAGTGTTGATGTAGAACAA
ACAGCAAATGAATCTTCGGCATCTATCGAAAGTGTATTAACTGATCATGTAGCAATGAGCCAGAGTGTACATTTAGATCG
CCAGTTCATGTCTACTGAGCACGTAAACCGTTATTTTGATCCAGAACTGTTAGATATTTTTCTTGAAGAAGCCGATGAGT
TGCTTGAAGGAATGGATACAGATCTTAATATTTGGGTTAATGACCAAGAGAACTTTGCTGCGCTTAATAATCTGATGCGC
TATTTGCATACCTTAAAAGGTGGGGCAAATATGATTCAGGCAAATTATATTGGTTTAATTGCACATGAATTAGAAAGTAT
TTATGAGCGTATAATTCAAAGACAGTTAGTTACTTCATCTGCTCTCATTGATTTTATTCGTCTAGTTCAAGATGATTTAG
CCGATCGTCTACAAATAGTACGTGAACAGCACTTAGATTATGCTGCTTCTCATACTATTCAAGCACTTAAGAGTGCGGGT
ACGGTATATAATTTACTTGGGTTTGCTGTTAAAGAGATGCAAGCAGAGTCTGAAACTGATGTTATATCGGAATCAAGTTT
TGAAGTATTACAACAAGAAGCTATACACAATACTGCGTTAAATCTCGATGAGTTAACTTCGAATTTTGAGCAGATTGTTG
AGTCTAATATTAGACTTGTTGAACACACAGAATTACAAGTTTTTGATGCAGAAGGCTATACAGATAATATTCAAGATCAG
GATATTGACTCTGTTGTCGAGCAGACATTTATGGAGGAAGCGGCCGAACTGTTAGAGATGGCCGATCACCTATTAAAGCA
GTGGTTTGAGCAGCGTACCAATCGTAGTATCTTGCTTCAGCTACAAAGAGCAGTGCACAGCTTGAAGGGTGGTTCCCGTA
TGGTGGGACTTGAAACCGTACAAGCGATTGCTTATCAACTTGAAAACGCTTTTGAAAAATTTGCGCTTTATCATTTTAGC
TCAAATATTTATGACAACTTGCTAGAGAGTGCGATTGTTTGGTTAAAAGAGGCAATTTTCAAGCAAAATTATCAACATTT
TGACGGTTTACAACAAAGTTTAGAAAATATTCAGTTTATTGAAACTGCAATACAAATTCCAAGTAAGTTGACCAGAACTG
ATTTATTTAGTACTGAACCTGTAATGAGCTTTGTGCAAGGTGATGGTGCAGAACCGCCGCCAATGATGGGGGCATGGGAA
CAAGCACAGCATCTTGAACAAAATAATGAGATGATCCGGGTTTCGGCAGATTTAATTGAGAAAATGATTGATTTGTCTGG
TGAAAATTCGATTAACCGTTCACGAATTGAAATGGATCTCAGTCAATTTGGTCATACGCTCGTGGAAATGGAATTAGCCA
TTCAACGACTAGCAGACCAGTTACGTCGAATGGAAGGCGAATTAGAAAGTCAGATTATTGCAAAACACGGTATTGAGCAC
TCTCGTTATACAGAATTTGATCCTCTAGAAATGGACCAATATTCTTCATTGAATCAATTATCGAAATCACTTGCCGAATC
TGCATCGGATTTAGTGGATTTCAAAAATACATTATCCGAAAAAATCAGAGACACCGAAAGTTTACTGGTACAACAATCAC
GTATTCAGGCCGAAATTCAAGAAGGGCTAATGCGAACGCGATTAGTACCATTCTCTCGATTGCTACCTCGTTTACAAAGA
ATTGTGAGGCAGACTTCTACTGCGTTGGATCGACCAGCAGAGCTTTTTGTTAATAATACCGAGGGTGAATTAGACCGGAC
GATGCTAGAGCGTTTGGTTACACCACTTGAGCACATGCTTCGAAATGCAATCGACCATGGTTTAGAAGATCGTGTGCAAC
GTGAACAAGCGCAAAAACCAGAGACTGGGCGTATTGAACTGAATATTCATCGTCAAGGTACGGATATTGTTGTTACATTT
AAGGATGATGGCCGAGGTATTGATATCGAGAAGGTCCGTCAAAAGGCTCTCTTGTCTGGTTTGATTAAGTCTGAACAAGT
ATTAGAACATCAAGATATTTTACAGTTGATTTTCCATCCCGGGTTAAGTACAGCCGATCAAGTCACTCAGATTTCAGGTC
GTGGTGTAGGGCTAGATGTTGTACAAAGTGATATTAAAGCTTTGGGCGGACATGTGAGTGTCGACTCTGTGTATGGGCAA
GGAACAATCTTTACAATACGTGTTCCAACCACAGTAGCGGTTAGTGATGCATTAATGGTTAAAGTTGCTGATCAGCAATT
TGCAATTCCATTGGCTCAAATTGATCGAATTGTTCGAGTTTCACCAACCTCATTAGAACAGTATTTTGGAAGCGCACAAG
AATTCTTTGAGTTTGAAAATAAACGTTATCCATTACGCTATTTATCTGAGTTTGTTGGTAATCAACCAATTCCACGTTTA
AGTGGGATGATGTATTCACTACCAGTATTAATGATTAAGACTAATAATGGACAAACAATTGCATTATTAGTTGATCAGCT
TATTGGTTCACGTGCGCAGATTGTGGTCAAGCCAATCGGGCAGCAGTTCTCTAGTATTGGCGCGATTGCAGGCGCAACTA
TTTTAGGTGATGGTCAAGTTTGTCTAATTTTAGATGGACAAAATATTGCTCGCCAAATTCAGTCTACCCGCCGACATAAG
CCGCTTAATGAAGCTATCTATAGACAACGTGAGTCTGATGAGCGCCGTCTTATTATGATTGTAGATGACTCTGTTACAGT
CCGTAAGGTAACAACTCGTTTACTCGAACGTCAGGGCTATGATGTAGTAACTGCTAAAGATGGTATCGATGCAATTGAGC
AGTTGGAAAATATTAAACCAGATCTGATGCTGCTTGATATTGAAATGCCGCGAATGGATGGCTTTGAGGTGCTTAACCTC
GTACGACATCATGATCTACATCAAGATATGCCAGTCATTATGATTACATCAAGAACTGGCGAAAAACACCGTGAACGAGC
ATTTACTTTAGGGGTTAACCAATACATGGGTAAACCTTTCCAAGAAGAAGACTTACTTCACAATATTGAAGCTTTTTTCA
TGACACGTGAAGAGGAACTTGCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

78.993

100

0.794


Multiple sequence alignment