Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AC2117_RS03315 Genome accession   NZ_LS999521
Coordinates   684676..685059 (+) Length   127 a.a.
NCBI ID   WP_042897425.1    Uniprot ID   A0A446ZGB5
Organism   Acinetobacter calcoaceticus isolate Acinetobacter calcoaceticus str. 2117     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 679676..690059
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AC2117_RS03305 (AC2117_00657) - 682577..683686 (-) 1110 WP_133976161.1 efflux RND transporter periplasmic adaptor subunit -
  AC2117_RS03310 (AC2117_00658) - 683755..684390 (-) 636 WP_197730978.1 hypothetical protein -
  AC2117_RS03315 (AC2117_00659) pilG 684676..685059 (+) 384 WP_042897425.1 twitching motility response regulator PilG Regulator
  AC2117_RS03320 (AC2117_00660) - 685083..685445 (+) 363 WP_005036319.1 response regulator -
  AC2117_RS03325 (AC2117_00661) - 685505..686041 (+) 537 WP_005309806.1 chemotaxis protein CheW -
  AC2117_RS03330 (AC2117_00662) - 686084..688165 (+) 2082 WP_042897421.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14214.26 Da        Isoelectric Point: 4.5762

>NTDB_id=1143487 AC2117_RS03315 WP_042897425.1 684676..685059(+) (pilG) [Acinetobacter calcoaceticus isolate Acinetobacter calcoaceticus str. 2117]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIIFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=1143487 AC2117_RS03315 WP_042897425.1 684676..685059(+) (pilG) [Acinetobacter calcoaceticus isolate Acinetobacter calcoaceticus str. 2117]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTAATTGATGACTCAAAAACCATTCGCCGTACAGCAGAAACTCTATT
ACAGCGCGAAGGCTGTGAAGTGATTACGGCAGTGGATGGGTTTGAAGCTTTGTCCAAAATTGCAGAAGCAAATCCTGATA
TTATTTTTGTCGATATCATGATGCCTCGTTTAGATGGTTATCAAACTTGCGCTTTGATTAAAAACTCTCAAAATTATCAG
AACATTCCCGTTATCATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAGTA
TTTGACGAAACCTTTTAGCAAAGATGAATTGTTAAACGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A446ZGB5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

99.213

100

0.992
  vicR Streptococcus mutans UA159

43.59

92.126

0.402
  pilH Synechocystis sp. PCC 6803

40.708

88.976

0.362

Multiple sequence alignment