Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | AC2117_RS01690 | Genome accession | NZ_LS999521 |
| Coordinates | 363477..363950 (+) | Length | 157 a.a. |
| NCBI ID | WP_133971519.1 | Uniprot ID | A0A446ZFF3 |
| Organism | Acinetobacter calcoaceticus isolate Acinetobacter calcoaceticus str. 2117 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 358477..368950
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AC2117_RS01665 (AC2117_00330) | - | 358936..361041 (-) | 2106 | WP_133971516.1 | RelA/SpoT family protein | - |
| AC2117_RS01670 | - | 361081..361170 (-) | 90 | Protein_318 | hypothetical protein | - |
| AC2117_RS01675 (AC2117_00331) | rpoZ | 361251..361529 (-) | 279 | WP_002116990.1 | DNA-directed RNA polymerase subunit omega | - |
| AC2117_RS01680 (AC2117_00332) | gmk | 361602..362231 (-) | 630 | WP_042895429.1 | guanylate kinase | - |
| AC2117_RS01685 (AC2117_00333) | ispH | 362354..363304 (+) | 951 | WP_042895425.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| AC2117_RS01690 (AC2117_00334) | fimU | 363477..363950 (+) | 474 | WP_133971519.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| AC2117_RS01695 (AC2117_00335) | pilV | 363944..364504 (+) | 561 | WP_133971521.1 | type IV pilus modification protein PilV | Machinery gene |
| AC2117_RS01700 (AC2117_00336) | pilW | 364504..365505 (+) | 1002 | WP_133971523.1 | PilW family protein | Machinery gene |
| AC2117_RS01705 (AC2117_00337) | pilX | 365502..366320 (+) | 819 | WP_197730966.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 17056.79 Da Isoelectric Point: 8.5109
>NTDB_id=1143477 AC2117_RS01690 WP_133971519.1 363477..363950(+) (fimU) [Acinetobacter calcoaceticus isolate Acinetobacter calcoaceticus str. 2117]
MRGITPQEGFTLVELMVTIAVMAIIAMMAAPSMSNLLENKRLEGNQRDLINALSEAKSQAILGRQDVSINLNSTALNTPT
SFNWKAASNNTLELKNIAADSTQSSLTTTTLTFNANGMVTNITQDTLLSICNSKIYKKKILILTKLGTLIFKAEETC
MRGITPQEGFTLVELMVTIAVMAIIAMMAAPSMSNLLENKRLEGNQRDLINALSEAKSQAILGRQDVSINLNSTALNTPT
SFNWKAASNNTLELKNIAADSTQSSLTTTTLTFNANGMVTNITQDTLLSICNSKIYKKKILILTKLGTLIFKAEETC
Nucleotide
Download Length: 474 bp
>NTDB_id=1143477 AC2117_RS01690 WP_133971519.1 363477..363950(+) (fimU) [Acinetobacter calcoaceticus isolate Acinetobacter calcoaceticus str. 2117]
ATGAGGGGAATTACTCCACAAGAAGGGTTCACCTTGGTTGAGCTTATGGTGACGATTGCAGTAATGGCGATTATTGCAAT
GATGGCTGCGCCGTCTATGTCAAATTTATTGGAAAATAAACGACTAGAGGGAAATCAACGAGACCTAATCAATGCTTTGT
CGGAAGCGAAGAGCCAAGCAATACTTGGTCGACAAGACGTTTCTATTAATTTGAATTCAACAGCTTTAAATACACCCACT
TCTTTTAATTGGAAAGCTGCTTCAAATAATACTCTTGAGCTCAAGAATATAGCTGCTGATAGCACACAAAGTTCCTTAAC
AACGACAACCTTGACCTTTAATGCGAATGGAATGGTAACTAATATCACCCAAGATACGCTTTTATCTATTTGTAATTCAA
AAATATATAAAAAGAAAATTCTTATTTTAACAAAGCTTGGCACATTAATTTTTAAAGCTGAGGAGACATGTTAA
ATGAGGGGAATTACTCCACAAGAAGGGTTCACCTTGGTTGAGCTTATGGTGACGATTGCAGTAATGGCGATTATTGCAAT
GATGGCTGCGCCGTCTATGTCAAATTTATTGGAAAATAAACGACTAGAGGGAAATCAACGAGACCTAATCAATGCTTTGT
CGGAAGCGAAGAGCCAAGCAATACTTGGTCGACAAGACGTTTCTATTAATTTGAATTCAACAGCTTTAAATACACCCACT
TCTTTTAATTGGAAAGCTGCTTCAAATAATACTCTTGAGCTCAAGAATATAGCTGCTGATAGCACACAAAGTTCCTTAAC
AACGACAACCTTGACCTTTAATGCGAATGGAATGGTAACTAATATCACCCAAGATACGCTTTTATCTATTTGTAATTCAA
AAATATATAAAAAGAAAATTCTTATTTTAACAAAGCTTGGCACATTAATTTTTAAAGCTGAGGAGACATGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
86.624 |
100 |
0.866 |