Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | STN4L_RS08665 | Genome accession | NZ_LS974444 |
| Coordinates | 1623068..1623586 (+) | Length | 172 a.a. |
| NCBI ID | WP_002951905.1 | Uniprot ID | A0A0P6V0E7 |
| Organism | Streptococcus thermophilus strain N4L | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1618068..1628586
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| STN4L_RS08635 (STN4L_02027) | - | 1618445..1618759 (+) | 315 | WP_014608696.1 | hypothetical protein | - |
| STN4L_RS08640 (STN4L_02028) | - | 1618746..1618973 (+) | 228 | WP_011681629.1 | hypothetical protein | - |
| STN4L_RS08645 (STN4L_02030) | - | 1619076..1619327 (+) | 252 | WP_113870475.1 | hypothetical protein | - |
| STN4L_RS08650 (STN4L_02031) | mutY | 1619654..1620805 (-) | 1152 | WP_011226550.1 | A/G-specific adenine glycosylase | - |
| STN4L_RS10985 | - | 1621594..1622547 (-) | 954 | Protein_1604 | hypothetical protein | - |
| STN4L_RS08660 (STN4L_02038) | rpsF | 1622766..1623056 (+) | 291 | WP_011681624.1 | 30S ribosomal protein S6 | - |
| STN4L_RS08665 (STN4L_02039) | ssb | 1623068..1623586 (+) | 519 | WP_002951905.1 | single-stranded DNA-binding protein | Machinery gene |
| STN4L_RS08670 (STN4L_02040) | rpsR | 1623628..1623867 (+) | 240 | WP_002945024.1 | 30S ribosomal protein S18 | - |
| STN4L_RS08675 (STN4L_02041) | - | 1623994..1624875 (-) | 882 | WP_011681623.1 | DUF4300 family protein | - |
| STN4L_RS08680 (STN4L_02042) | - | 1624992..1625663 (-) | 672 | WP_011681622.1 | DUF1129 domain-containing protein | - |
| STN4L_RS08685 (STN4L_02043) | - | 1625734..1626678 (-) | 945 | WP_002951901.1 | magnesium transporter CorA family protein | - |
Sequence
Protein
Download Length: 172 a.a. Molecular weight: 18680.41 Da Isoelectric Point: 4.7482
>NTDB_id=1143057 STN4L_RS08665 WP_002951905.1 1623068..1623586(+) (ssb) [Streptococcus thermophilus strain N4L]
MINNVVLVGRMTRDAELRYTPSNVAVATFSLAVNRNFKGANGERETDFINCVIWRQQAENLANWAKKGALVGITGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRAAREGHSGGSYNVGGFDNSNSFGGGASTGGSFGESQPAQSTPNFGRDESPFGNS
NPMDISDDDLPF
MINNVVLVGRMTRDAELRYTPSNVAVATFSLAVNRNFKGANGERETDFINCVIWRQQAENLANWAKKGALVGITGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRAAREGHSGGSYNVGGFDNSNSFGGGASTGGSFGESQPAQSTPNFGRDESPFGNS
NPMDISDDDLPF
Nucleotide
Download Length: 519 bp
>NTDB_id=1143057 STN4L_RS08665 WP_002951905.1 1623068..1623586(+) (ssb) [Streptococcus thermophilus strain N4L]
ATGATTAATAATGTCGTACTCGTTGGTCGCATGACCCGTGATGCGGAACTTCGTTACACACCAAGTAATGTTGCTGTTGC
AACATTCAGCCTTGCGGTTAATCGTAACTTTAAAGGTGCTAATGGTGAACGTGAAACTGACTTTATTAACTGTGTTATCT
GGCGCCAGCAGGCTGAAAATTTGGCTAACTGGGCTAAGAAAGGTGCATTGGTTGGAATTACAGGTCGTATTCAGACCCGT
AACTATGAAAATCAACAAGGTCAACGTGTTTACGTAACTGAAGTTGTCGCTGATAATTTCCAAATGTTGGAAAGCCGTGC
GGCACGTGAAGGTCATAGTGGTGGTTCATACAACGTTGGAGGATTTGATAATTCAAATTCATTCGGTGGTGGAGCTTCCA
CTGGTGGTTCGTTTGGTGAATCACAACCTGCACAATCTACACCAAACTTCGGTCGTGATGAAAGTCCATTTGGTAATTCA
AATCCAATGGATATTTCAGATGACGATCTTCCATTCTAA
ATGATTAATAATGTCGTACTCGTTGGTCGCATGACCCGTGATGCGGAACTTCGTTACACACCAAGTAATGTTGCTGTTGC
AACATTCAGCCTTGCGGTTAATCGTAACTTTAAAGGTGCTAATGGTGAACGTGAAACTGACTTTATTAACTGTGTTATCT
GGCGCCAGCAGGCTGAAAATTTGGCTAACTGGGCTAAGAAAGGTGCATTGGTTGGAATTACAGGTCGTATTCAGACCCGT
AACTATGAAAATCAACAAGGTCAACGTGTTTACGTAACTGAAGTTGTCGCTGATAATTTCCAAATGTTGGAAAGCCGTGC
GGCACGTGAAGGTCATAGTGGTGGTTCATACAACGTTGGAGGATTTGATAATTCAAATTCATTCGGTGGTGGAGCTTCCA
CTGGTGGTTCGTTTGGTGAATCACAACCTGCACAATCTACACCAAACTTCGGTCGTGATGAAAGTCCATTTGGTAATTCA
AATCCAATGGATATTTCAGATGACGATCTTCCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
58.621 |
100 |
0.593 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
54.301 |
100 |
0.587 |
| ssb | Glaesserella parasuis strain SC1401 |
32.984 |
100 |
0.366 |