Detailed information NTG1142667

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: DQL14_RS07355
• Genome accession: NZ_LS483488
• Coordinates: 1468485..1469285 (-)
• Length: 266 a.a.
• NCBI ID: WP_108169258.1
• Uniprot ID: -
• Organism: Helicobacter pylori NCTC 11637 = CCUG 17874 = ATCC 43504 = JCM 12093 strain NCTC 11637
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1463485..1474285

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQL14_RS07325 (NCTC11637_01447)	recJ	1463628..1465178 (+)	1551	WP_108169252.1	single-stranded-DNA-specific exonuclease RecJ	-
DQL14_RS07330 (NCTC11637_01448)	-	1465178..1466059 (+)	882	WP_108169253.1	RluA family pseudouridine synthase	-
DQL14_RS07335 (NCTC11637_01449)	-	1466162..1466722 (-)	561	WP_108169254.1	hypothetical protein	-
DQL14_RS07340 (NCTC11637_01450)	-	1466706..1467044 (-)	339	WP_108169255.1	hypothetical protein	-
DQL14_RS07345 (NCTC11637_01451)	-	1467172..1467954 (-)	783	WP_108169256.1	tetratricopeptide repeat protein	-
DQL14_RS07350 (NCTC11637_01453)	dprB	1468084..1468488 (-)	405	WP_108169257.1	Holliday junction resolvase RuvX	Machinery gene
DQL14_RS07355 (NCTC11637_01454)	dprA	1468485..1469285 (-)	801	WP_108169258.1	DNA-processing protein DprA	Machinery gene
DQL14_RS07360 (NCTC11637_01455)	minE	1469297..1469530 (-)	234	WP_000051425.1	cell division topological specificity factor MinE	-
DQL14_RS07365 (NCTC11637_01456)	minD	1469527..1470333 (-)	807	WP_108169259.1	septum site-determining protein MinD	-
DQL14_RS07370 (NCTC11637_01457)	ilvC	1470357..1471349 (-)	993	WP_108169260.1	ketol-acid reductoisomerase	-
DQL14_RS07380 (NCTC11637_01459)	-	1471598..1472380 (+)	783	WP_108169261.1	NAD+ synthase	-
DQL14_RS07385 (NCTC11637_01460)	-	1472377..1473315 (+)	939	WP_108169262.1	tetraacyldisaccharide 4'-kinase	-
DQL14_RS07390 (NCTC11637_01461)	pseH	1473248..1473790 (-)	543	WP_108169263.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29787.67 Da
• Isoelectric Point: 8.5826

>NTDB_id=1142667 DQL14_RS07355 WP_108169258.1 1468485..1469285(-) (dprA) [Helicobacter pylori NCTC 11637 = CCUG 17874 = ATCC 43504 = JCM 12093 strain NCTC 11637]
MKSHFQYSALENIPKAFDILKDPPKKLYCVGDTKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTITLSPCSLDLIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHLVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=1142667 DQL14_RS07355 WP_108169258.1 1468485..1469285(-) (dprA) [Helicobacter pylori NCTC 11637 = CCUG 17874 = ATCC 43504 = JCM 12093 strain NCTC 11637]
ATGAAAAGCCATTTCCAATACAGCGCGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCTCCTAAAAAACT
CTATTGTGTGGGCGATACCAAGCTTTTAGAAGCGCCTTTAAAAGTGGCTATCATAGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGGGGAGCGTTGGGCGTG
GATATTATCGCTCAAGAAAACGCCTTGCCAAAAACGATCACGCTTTCGCCTTGCAGTTTGGATTTGATCTATCCTACAAA
CAATCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTCATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCTTGGTGATCGCTTTAAGCGATGCGGTGATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCTCAAAAATACCAAAAACCCTTGTTTGTTTTGCCTCAGCGCTTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACTCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATGAAAGATGAATTTTTAGAATATTGCGCCAAAAACCCCAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGCATCAATCATCTCGTGGTGTTAGCATG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.617	100	0.966
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414