Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | DQL14_RS07350 | Genome accession | NZ_LS483488 |
| Coordinates | 1468084..1468488 (-) | Length | 134 a.a. |
| NCBI ID | WP_108169257.1 | Uniprot ID | - |
| Organism | Helicobacter pylori NCTC 11637 = CCUG 17874 = ATCC 43504 = JCM 12093 strain NCTC 11637 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1463084..1473488
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQL14_RS07325 (NCTC11637_01447) | recJ | 1463628..1465178 (+) | 1551 | WP_108169252.1 | single-stranded-DNA-specific exonuclease RecJ | - |
| DQL14_RS07330 (NCTC11637_01448) | - | 1465178..1466059 (+) | 882 | WP_108169253.1 | RluA family pseudouridine synthase | - |
| DQL14_RS07335 (NCTC11637_01449) | - | 1466162..1466722 (-) | 561 | WP_108169254.1 | hypothetical protein | - |
| DQL14_RS07340 (NCTC11637_01450) | - | 1466706..1467044 (-) | 339 | WP_108169255.1 | hypothetical protein | - |
| DQL14_RS07345 (NCTC11637_01451) | - | 1467172..1467954 (-) | 783 | WP_108169256.1 | tetratricopeptide repeat protein | - |
| DQL14_RS07350 (NCTC11637_01453) | dprB | 1468084..1468488 (-) | 405 | WP_108169257.1 | Holliday junction resolvase RuvX | Machinery gene |
| DQL14_RS07355 (NCTC11637_01454) | dprA | 1468485..1469285 (-) | 801 | WP_108169258.1 | DNA-processing protein DprA | Machinery gene |
| DQL14_RS07360 (NCTC11637_01455) | minE | 1469297..1469530 (-) | 234 | WP_000051425.1 | cell division topological specificity factor MinE | - |
| DQL14_RS07365 (NCTC11637_01456) | minD | 1469527..1470333 (-) | 807 | WP_108169259.1 | septum site-determining protein MinD | - |
| DQL14_RS07370 (NCTC11637_01457) | ilvC | 1470357..1471349 (-) | 993 | WP_108169260.1 | ketol-acid reductoisomerase | - |
| DQL14_RS07380 (NCTC11637_01459) | - | 1471598..1472380 (+) | 783 | WP_108169261.1 | NAD+ synthase | - |
| DQL14_RS07385 (NCTC11637_01460) | - | 1472377..1473315 (+) | 939 | WP_108169262.1 | tetraacyldisaccharide 4'-kinase | - |
Sequence
Protein
Download Length: 134 a.a. Molecular weight: 15283.76 Da Isoelectric Point: 8.7247
>NTDB_id=1142666 DQL14_RS07350 WP_108169257.1 1468084..1468488(-) (dprB) [Helicobacter pylori NCTC 11637 = CCUG 17874 = ATCC 43504 = JCM 12093 strain NCTC 11637]
MILACDVGLKRIGIAVLLNGVILPLEAILRHNKNQASRDLSDLLREKNIQVLVVGKPNESYADTHARIEHFIKLVDFKGE
IVFINEDRSSIEAYENLEHLGRKNKRLAIKDGRLDSLSACRILERYCQQVLKNH
MILACDVGLKRIGIAVLLNGVILPLEAILRHNKNQASRDLSDLLREKNIQVLVVGKPNESYADTHARIEHFIKLVDFKGE
IVFINEDRSSIEAYENLEHLGRKNKRLAIKDGRLDSLSACRILERYCQQVLKNH
Nucleotide
Download Length: 405 bp
>NTDB_id=1142666 DQL14_RS07350 WP_108169257.1 1468084..1468488(-) (dprB) [Helicobacter pylori NCTC 11637 = CCUG 17874 = ATCC 43504 = JCM 12093 strain NCTC 11637]
ATGATTTTAGCATGCGATGTGGGGTTAAAACGCATTGGCATCGCTGTGCTTTTAAACGGCGTTATCTTGCCTTTAGAAGC
GATTTTACGCCACAACAAAAATCAGGCCTCTAGGGATTTGAGCGATTTATTGAGGGAAAAAAACATTCAGGTGCTAGTGG
TGGGCAAGCCTAATGAAAGCTATGCGGATACCCACGCCCGCATTGAGCATTTCATCAAGCTTGTAGATTTTAAGGGCGAA
ATCGTTTTTATTAATGAAGACAGATCCAGCATAGAAGCCTATGAAAATTTAGAGCATTTGGGTAGGAAAAATAAGCGGCT
CGCTATCAAAGACGGCCGGCTAGATTCTTTGAGCGCTTGCAGGATCTTAGAGCGCTATTGCCAGCAGGTTTTAAAAAATC
ATTAG
ATGATTTTAGCATGCGATGTGGGGTTAAAACGCATTGGCATCGCTGTGCTTTTAAACGGCGTTATCTTGCCTTTAGAAGC
GATTTTACGCCACAACAAAAATCAGGCCTCTAGGGATTTGAGCGATTTATTGAGGGAAAAAAACATTCAGGTGCTAGTGG
TGGGCAAGCCTAATGAAAGCTATGCGGATACCCACGCCCGCATTGAGCATTTCATCAAGCTTGTAGATTTTAAGGGCGAA
ATCGTTTTTATTAATGAAGACAGATCCAGCATAGAAGCCTATGAAAATTTAGAGCATTTGGGTAGGAAAAATAAGCGGCT
CGCTATCAAAGACGGCCGGCTAGATTCTTTGAGCGCTTGCAGGATCTTAGAGCGCTATTGCCAGCAGGTTTTAAAAAATC
ATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
95.522 |
100 |
0.955 |