Detailed information NTG0114245

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HPOKI828_RS01705
• Genome accession: NZ_CP006826
• Coordinates: 338782..339582 (+)
• Length: 266 a.a.
• NCBI ID: WP_025222561.1
• Uniprot ID: -
• Organism: Helicobacter pylori oki828
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 333782..344582

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPOKI828_RS01670 (HPOKI828_01750)	pseH	334276..334818 (+)	543	WP_025222557.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HPOKI828_RS01675 (HPOKI828_01755)	-	334751..335689 (-)	939	WP_025222558.1	tetraacyldisaccharide 4'-kinase	-
HPOKI828_RS01680 (HPOKI828_01760)	-	335686..336468 (-)	783	WP_025222559.1	NAD+ synthase	-
HPOKI828_RS01690	ilvC	336717..337709 (+)	993	WP_001207811.1	ketol-acid reductoisomerase	-
HPOKI828_RS01695 (HPOKI828_01775)	minD	337734..338540 (+)	807	WP_025222560.1	septum site-determining protein MinD	-
HPOKI828_RS01700 (HPOKI828_01780)	minE	338537..338770 (+)	234	WP_000051412.1	cell division topological specificity factor MinE	-
HPOKI828_RS01705 (HPOKI828_01785)	dprA	338782..339582 (+)	801	WP_025222561.1	DNA-processing protein DprA	Machinery gene
HPOKI828_RS01710 (HPOKI828_01790)	dprB	339579..339983 (+)	405	WP_025222562.1	Holliday junction resolvase RuvX	Machinery gene
HPOKI828_RS01715 (HPOKI828_01795)	-	340113..340367 (+)	255	WP_025222563.1	tetratricopeptide repeat protein	-
HPOKI828_RS01720 (HPOKI828_01800)	-	340555..340893 (+)	339	WP_025222564.1	hypothetical protein	-
HPOKI828_RS01725 (HPOKI828_01805)	-	340877..341437 (+)	561	WP_025222565.1	hypothetical protein	-
HPOKI828_RS01730 (HPOKI828_01815)	-	341610..342491 (-)	882	WP_025222566.1	RluA family pseudouridine synthase	-
HPOKI828_RS01735 (HPOKI828_01820)	recJ	342491..344041 (-)	1551	WP_025222567.1	single-stranded-DNA-specific exonuclease RecJ	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29842.74 Da
• Isoelectric Point: 8.7885

>NTDB_id=114245 HPOKI828_RS01705 WP_025222561.1 338782..339582(+) (dprA) [Helicobacter pylori oki828]
MKSNFQYGVLENIPKAFDILKDPPKKLYYAGDIKLLDAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEIKDEFLEYCTKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=114245 HPOKI828_RS01705 WP_025222561.1 338782..339582(+) (dprA) [Helicobacter pylori oki828]
ATGAAAAGCAACTTCCAATACGGCGTGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTATGCAGGCGATATAAAGCTTTTAGACGCGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCTACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCCAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTAATTATCCCCCAAGCGGATTTGAAAAGCGGC
TCTATGAGCAGCGCTAGATTAGCCCAAAAGTATCAAAAACCCTTATTTGTTTTGCCTCAGCGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGATC
ACCATTTAAAAGAAATGCCTGAAATCAAAGACGAATTTTTGGAATATTGCACCAAAAACCCGAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGACAAGCTTTTAGAATACGAGCTGTTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (14-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	95.113	100	0.951
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.472	86.09	0.417