Detailed information NTG0114223

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HPOKI673_RS01700
• Genome accession: NZ_CP006825
• Coordinates: 338326..339126 (+)
• Length: 266 a.a.
• NCBI ID: WP_025313691.1
• Uniprot ID: -
• Organism: Helicobacter pylori oki673
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 333326..344126

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPOKI673_RS01665 (HPOKI673_01755)	pseH	333821..334363 (+)	543	WP_025313687.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HPOKI673_RS01670 (HPOKI673_01760)	-	334296..335234 (-)	939	WP_025313688.1	tetraacyldisaccharide 4'-kinase	-
HPOKI673_RS01675 (HPOKI673_01765)	-	335231..336013 (-)	783	WP_025313689.1	NAD+ synthase	-
HPOKI673_RS01685	ilvC	336262..337254 (+)	993	WP_025313690.1	ketol-acid reductoisomerase	-
HPOKI673_RS01690 (HPOKI673_01780)	minD	337278..338084 (+)	807	WP_015643076.1	septum site-determining protein MinD	-
HPOKI673_RS01695 (HPOKI673_01785)	minE	338081..338314 (+)	234	WP_000051412.1	cell division topological specificity factor MinE	-
HPOKI673_RS01700 (HPOKI673_01790)	dprA	338326..339126 (+)	801	WP_025313691.1	DNA-processing protein DprA	Machinery gene
HPOKI673_RS01705 (HPOKI673_01795)	dprB	339123..339527 (+)	405	WP_025313692.1	Holliday junction resolvase RuvX	Machinery gene
HPOKI673_RS01710 (HPOKI673_01800)	-	339586..339909 (+)	324	WP_025313693.1	cysteine-rich Sel1 repeat protein	-
HPOKI673_RS01715 (HPOKI673_01805)	-	340099..340437 (+)	339	WP_024948198.1	hypothetical protein	-
HPOKI673_RS01720 (HPOKI673_01810)	-	340421..340987 (+)	567	WP_025287929.1	hypothetical protein	-
HPOKI673_RS01725 (HPOKI673_01820)	-	341160..342041 (-)	882	WP_025313694.1	RluA family pseudouridine synthase	-
HPOKI673_RS01730 (HPOKI673_01825)	recJ	342041..343591 (-)	1551	WP_025313695.1	single-stranded-DNA-specific exonuclease RecJ	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29784.66 Da
• Isoelectric Point: 8.7885

>NTDB_id=114223 HPOKI673_RS01700 WP_025313691.1 338326..339126(+) (dprA) [Helicobacter pylori oki673]
MKSNFQYGALENIPKAFDILKDPPKKLYYAGDIKLLDAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEIKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=114223 HPOKI673_RS01700 WP_025313691.1 338326..339126(+) (dprA) [Helicobacter pylori oki673]
ATGAAAAGCAACTTCCAATACGGCGCGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTATGCAGGCGATATAAAGCTTTTAGACGCGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCTACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCCAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTAATTATCCCCCAAGCGGATTTGAAAAGCGGC
TCTATGAGCAGTGCGAGACTCGCCCAAAAGTATCAAAAACCCTTATTTGTTTTGCCCCAGCGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGACAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATCAAAGACGAATTTTTAGAATATTGCGCCAAAAATCCGAGCTATGAAGAGGCGTAT
CTCAAATTTGGAGACAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (13-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	95.489	100	0.955
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.472	86.09	0.417