Detailed information
Bioinformatically predicted
Overview
| Name | comO | Type | Machinery gene |
| Locus tag | DQN30_RS09245 | Genome accession | NZ_LS483458 |
| Coordinates | 1905397..1906113 (+) | Length | 238 a.a. |
| NCBI ID | WP_111697142.1 | Uniprot ID | - |
| Organism | Haemophilus haemolyticus strain NCTC10839 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1900397..1911113
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQN30_RS09225 (NCTC10839_01846) | - | 1901205..1901735 (-) | 531 | WP_111697085.1 | DsbE family thiol:disulfide interchange protein | - |
| DQN30_RS09230 (NCTC10839_01847) | nrfE | 1901735..1903642 (-) | 1908 | WP_111697086.1 | heme lyase NrfEFG subunit NrfE | - |
| DQN30_RS09235 (NCTC10839_01848) | suhB | 1903882..1904685 (-) | 804 | WP_005633301.1 | inositol-1-monophosphatase | - |
| DQN30_RS09240 (NCTC10839_01849) | comN | 1904885..1905403 (+) | 519 | WP_046953321.1 | type II secretion system protein | Machinery gene |
| DQN30_RS09245 (NCTC10839_01850) | comO | 1905397..1906113 (+) | 717 | WP_111697142.1 | type II secretion system protein J | Machinery gene |
| DQN30_RS09250 (NCTC10839_01851) | comP | 1906113..1906796 (+) | 684 | WP_111697087.1 | DUF2572 family protein | Machinery gene |
| DQN30_RS09255 (NCTC10839_01852) | comQ | 1906789..1907076 (+) | 288 | WP_172454076.1 | DUF5374 domain-containing protein | Machinery gene |
| DQN30_RS09260 (NCTC10839_01853) | recC | 1907124..1910498 (+) | 3375 | WP_111697089.1 | exodeoxyribonuclease V subunit gamma | - |
| DQN30_RS09265 (NCTC10839_01854) | nrdR | 1910561..1911010 (+) | 450 | WP_005627362.1 | transcriptional regulator NrdR | - |
Sequence
Protein
Download Length: 238 a.a. Molecular weight: 26736.89 Da Isoelectric Point: 8.9327
>NTDB_id=1142206 DQN30_RS09245 WP_111697142.1 1905397..1906113(+) (comO) [Haemophilus haemolyticus strain NCTC10839]
MMKTLLKGQTLLALMISLALSSLLLLSISHFYVQIQTQNQHMLLHLKLQAELQRTLQLIGKDLRRLGFRALNTKGTESNL
SLFELDEQGTAIFISQEDNAPPNSCVLFFYDLNKNGCIGKDSPKTCMKNGKNTSKNSTEELFGYKVSNKMIKTKLTYQSV
IPTNCTAESCKRAFQQTACNAGGGWTDLLDNNEYEVTTLQFNWLIEGKGLEIKLKGNLKQTPNISYETSLVVALWNQK
MMKTLLKGQTLLALMISLALSSLLLLSISHFYVQIQTQNQHMLLHLKLQAELQRTLQLIGKDLRRLGFRALNTKGTESNL
SLFELDEQGTAIFISQEDNAPPNSCVLFFYDLNKNGCIGKDSPKTCMKNGKNTSKNSTEELFGYKVSNKMIKTKLTYQSV
IPTNCTAESCKRAFQQTACNAGGGWTDLLDNNEYEVTTLQFNWLIEGKGLEIKLKGNLKQTPNISYETSLVVALWNQK
Nucleotide
Download Length: 717 bp
>NTDB_id=1142206 DQN30_RS09245 WP_111697142.1 1905397..1906113(+) (comO) [Haemophilus haemolyticus strain NCTC10839]
ATCATGAAAACATTATTAAAAGGGCAAACCCTATTAGCACTGATGATTTCGCTAGCGTTGTCATCTTTATTATTACTAAG
CATTTCGCATTTTTATGTGCAAATACAAACGCAAAATCAACACATGTTATTGCATTTAAAACTACAAGCAGAATTACAAC
GTACATTACAGCTCATCGGTAAAGATCTTCGGCGATTGGGATTTAGAGCATTAAATACAAAAGGAACAGAAAGCAATTTA
TCTTTATTTGAATTAGATGAACAAGGCACAGCTATTTTCATTAGCCAAGAAGATAACGCACCACCTAATAGCTGCGTGTT
GTTCTTTTATGATTTAAATAAAAATGGTTGTATTGGCAAAGATTCACCGAAAACCTGTATGAAAAATGGGAAAAATACAT
CCAAAAACAGTACAGAAGAATTATTCGGTTATAAAGTGAGTAACAAAATGATAAAAACCAAACTAACTTATCAAAGTGTT
ATTCCAACTAATTGCACAGCAGAAAGCTGTAAGCGCGCTTTTCAACAAACCGCTTGTAACGCTGGAGGCGGCTGGACGGA
TTTATTAGACAACAATGAATACGAAGTCACTACCCTGCAATTTAATTGGTTAATCGAAGGCAAAGGATTAGAAATCAAGC
TAAAAGGAAATTTAAAACAAACTCCAAATATCAGTTATGAAACCTCCCTTGTTGTTGCTCTATGGAATCAAAAATAA
ATCATGAAAACATTATTAAAAGGGCAAACCCTATTAGCACTGATGATTTCGCTAGCGTTGTCATCTTTATTATTACTAAG
CATTTCGCATTTTTATGTGCAAATACAAACGCAAAATCAACACATGTTATTGCATTTAAAACTACAAGCAGAATTACAAC
GTACATTACAGCTCATCGGTAAAGATCTTCGGCGATTGGGATTTAGAGCATTAAATACAAAAGGAACAGAAAGCAATTTA
TCTTTATTTGAATTAGATGAACAAGGCACAGCTATTTTCATTAGCCAAGAAGATAACGCACCACCTAATAGCTGCGTGTT
GTTCTTTTATGATTTAAATAAAAATGGTTGTATTGGCAAAGATTCACCGAAAACCTGTATGAAAAATGGGAAAAATACAT
CCAAAAACAGTACAGAAGAATTATTCGGTTATAAAGTGAGTAACAAAATGATAAAAACCAAACTAACTTATCAAAGTGTT
ATTCCAACTAATTGCACAGCAGAAAGCTGTAAGCGCGCTTTTCAACAAACCGCTTGTAACGCTGGAGGCGGCTGGACGGA
TTTATTAGACAACAATGAATACGAAGTCACTACCCTGCAATTTAATTGGTTAATCGAAGGCAAAGGATTAGAAATCAAGC
TAAAAGGAAATTTAAAACAAACTCCAAATATCAGTTATGAAACCTCCCTTGTTGTTGCTCTATGGAATCAAAAATAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comO | Haemophilus influenzae Rd KW20 |
94.958 |
100 |
0.95 |