Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Regulator
Locus tag   DQL12_RS10015 Genome accession   NZ_LS483450
Coordinates   1845924..1846544 (-) Length   206 a.a.
NCBI ID   WP_000839910.1    Uniprot ID   A0A0B7LL05
Organism   Streptococcus pneumoniae strain 4041STDY6583227     
Function   fratricide immunity (predicted from homology)   
Competence regulation

Genomic Context

Location: 1840924..1851544
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL12_RS09990 recA 1841302..1842468 (-) 1167 WP_001085463.1 recombinase RecA Machinery gene
  DQL12_RS09995 cinA 1842523..1843779 (-) 1257 WP_000642707.1 competence/damage-inducible protein A Machinery gene
  DQL12_RS10000 brpA 1843863..1844879 (-) 1017 WP_050202865.1 biofilm formation/cell division transcriptional regulator BrpA -
  DQL12_RS10005 - 1844887..1845405 (-) 519 WP_000455537.1 GNAT family N-acetyltransferase -
  DQL12_RS10010 tsaE 1845395..1845838 (-) 444 WP_000288232.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  DQL12_RS10015 comM 1845924..1846544 (-) 621 WP_000839910.1 hypothetical protein Regulator
  DQL12_RS10025 - 1846927..1847790 (-) 864 WP_050255560.1 helix-turn-helix domain-containing protein -
  DQL12_RS12505 - 1847978..1848147 (+) 170 Protein_1865 PhrA family quorum-sensing system peptide -
  DQL12_RS10035 - 1848462..1848758 (+) 297 WP_000911560.1 lactococcin 972 family bacteriocin -
  DQL12_RS10040 - 1848861..1850876 (+) 2016 WP_050118945.1 DUF1430 domain-containing protein -
  DQL12_RS10045 - 1850878..1851510 (+) 633 WP_000571415.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 206 a.a.        Molecular weight: 23526.64 Da        Isoelectric Point: 10.1254

>NTDB_id=1142002 DQL12_RS10015 WP_000839910.1 1845924..1846544(-) (comM) [Streptococcus pneumoniae strain 4041STDY6583227]
MKSMRILFLLALIQISLSSCFLWKECILSFKQSTAFFIGSMVFVSGICAGVNYLYTRKQEVHSVLASKKSVKLFYSMLLL
INLLGAVLVLSDNLFIKNTLQQELVDFLLPSFFFLFGLDLLIFLPLKKYVRDFLAMLDRKKTVLVTSLATLLFLRNPMTI
VSLLIYIGLGLFFAAYLVPNSVKKEVSFYGHIFRDLVLVIVTLIFF

Nucleotide


Download         Length: 621 bp        

>NTDB_id=1142002 DQL12_RS10015 WP_000839910.1 1845924..1846544(-) (comM) [Streptococcus pneumoniae strain 4041STDY6583227]
ATGAAATCAATGAGAATCTTATTTTTGTTAGCTTTAATTCAAATCAGTTTGAGTAGCTGTTTCCTATGGAAGGAATGCAT
CTTGTCCTTTAAACAAAGTACAGCTTTTTTCATCGGAAGCATGGTTTTCGTTTCAGGAATCTGTGCTGGAGTAAATTATC
TTTATACCCGTAAGCAAGAAGTCCATAGTGTCCTAGCCAGTAAGAAGTCGGTGAAGCTTTTTTACAGTATGTTACTCTTA
ATTAATTTGTTAGGAGCTGTTCTTGTTTTGTCAGATAACTTGTTCATCAAAAATACGCTGCAGCAAGAATTAGTTGACTT
TTTATTGCCATCCTTCTTTTTCCTATTTGGGCTAGATTTGCTGATTTTTTTACCCTTGAAAAAATACGTGCGCGATTTTC
TTGCTATGCTAGACAGAAAAAAGACAGTGTTGGTGACTAGTTTAGCAACACTTCTTTTCTTAAGAAATCCAATGACCATT
GTCTCACTTCTGATTTATATTGGACTGGGCTTGTTTTTTGCAGCCTATCTTGTCCCAAATTCGGTTAAGAAGGAAGTTTC
CTTTTATGGTCATATTTTCCGAGATCTTGTATTGGTCATTGTTACGCTCATTTTCTTTTAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0B7LL05

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Streptococcus pneumoniae D39

99.515

100

0.995
  comM Streptococcus pneumoniae R6

99.515

100

0.995
  comM Streptococcus pneumoniae TIGR4

99.515

100

0.995
  comM Streptococcus mitis NCTC 12261

38.974

94.66

0.369
  comM Streptococcus mitis SK321

38.974

94.66

0.369

Multiple sequence alignment