Detailed information NTG0114179

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HPOKI154_RS01710
• Genome accession: NZ_CP006823
• Coordinates: 338694..339494 (+)
• Length: 266 a.a.
• NCBI ID: WP_025366752.1
• Uniprot ID: -
• Organism: Helicobacter pylori oki154
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 333694..344494

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPOKI154_RS01675 (HPOKI154_01765)	pseH	334189..334731 (+)	543	WP_000742580.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HPOKI154_RS01680 (HPOKI154_01770)	-	334664..335602 (-)	939	WP_025366750.1	tetraacyldisaccharide 4'-kinase	-
HPOKI154_RS01685 (HPOKI154_01775)	-	335599..336381 (-)	783	WP_015428726.1	NAD+ synthase	-
HPOKI154_RS01695	ilvC	336630..337622 (+)	993	WP_025366751.1	ketol-acid reductoisomerase	-
HPOKI154_RS01700 (HPOKI154_01790)	minD	337646..338452 (+)	807	WP_015643076.1	septum site-determining protein MinD	-
HPOKI154_RS01705 (HPOKI154_01795)	minE	338449..338682 (+)	234	WP_000051412.1	cell division topological specificity factor MinE	-
HPOKI154_RS01710 (HPOKI154_01800)	dprA	338694..339494 (+)	801	WP_025366752.1	DNA-processing protein DprA	Machinery gene
HPOKI154_RS01715 (HPOKI154_01805)	dprB	339491..339895 (+)	405	WP_025313692.1	Holliday junction resolvase RuvX	Machinery gene
HPOKI154_RS01720 (HPOKI154_01810)	-	339954..340385 (+)	432	WP_038416393.1	tetratricopeptide repeat protein	-
HPOKI154_RS01725 (HPOKI154_01815)	-	340575..340913 (+)	339	WP_024948198.1	hypothetical protein	-
HPOKI154_RS01730 (HPOKI154_01820)	-	340897..341463 (+)	567	WP_025287929.1	hypothetical protein	-
HPOKI154_RS01735 (HPOKI154_01830)	-	341636..342517 (-)	882	WP_025366753.1	RluA family pseudouridine synthase	-
HPOKI154_RS01740 (HPOKI154_01835)	recJ	342517..344067 (-)	1551	WP_025366754.1	single-stranded-DNA-specific exonuclease RecJ	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29812.71 Da
• Isoelectric Point: 8.7885

>NTDB_id=114179 HPOKI154_RS01710 WP_025366752.1 338694..339494(+) (dprA) [Helicobacter pylori oki154]
MKSNFQYGVLENIPKAFDILKDPPKKLYYAGDIKLLDAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEIKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=114179 HPOKI154_RS01710 WP_025366752.1 338694..339494(+) (dprA) [Helicobacter pylori oki154]
ATGAAAAGCAACTTCCAATACGGCGTGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTATGCAGGCGATATAAAGCTTTTAGACGCGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCTACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCCAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTAATTATCCCCCAAGCGGATTTGAAAAGCGGC
TCTATGAGCAGTGCGAGACTCGCCCAAAAGTATCAAAAACCCTTATTTGTTTTGCCCCAGCGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGACAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATCAAAGACGAATTTTTAGAATATTGCGCCAAAAATCCGAGCTATGAAGAGGCGTAT
CTCAAATTTGGAGACAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (14-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	95.489	100	0.955
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.472	86.09	0.417