Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | DQL20_RS08850 | Genome accession | NZ_LS483444 |
| Coordinates | 1696844..1697338 (-) | Length | 164 a.a. |
| NCBI ID | WP_006595680.1 | Uniprot ID | A0A4Z1DUY6 |
| Organism | Streptococcus australis strain NCTC13166 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1691844..1702338
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQL20_RS08830 (NCTC11371_01727) | - | 1694180..1695124 (+) | 945 | WP_006597173.1 | magnesium transporter CorA family protein | - |
| DQL20_RS08835 (NCTC11371_01728) | - | 1695153..1695827 (+) | 675 | WP_006595682.1 | DUF1129 family protein | - |
| DQL20_RS08840 (NCTC11371_01729) | - | 1695862..1696383 (-) | 522 | WP_006595681.1 | GNAT family N-acetyltransferase | - |
| DQL20_RS08845 (NCTC11371_01730) | rpsR | 1696563..1696802 (-) | 240 | WP_000068664.1 | 30S ribosomal protein S18 | - |
| DQL20_RS08850 (NCTC11371_01731) | ssb | 1696844..1697338 (-) | 495 | WP_006595680.1 | single-stranded DNA-binding protein | Machinery gene |
| DQL20_RS08855 (NCTC11371_01732) | rpsF | 1697365..1697655 (-) | 291 | WP_006595679.1 | 30S ribosomal protein S6 | - |
| DQL20_RS08860 (NCTC11371_01733) | - | 1697934..1698986 (+) | 1053 | WP_006597154.1 | bifunctional glycosyltransferase family 2/GtrA family protein | - |
| DQL20_RS08865 (NCTC11371_01734) | - | 1698973..1699875 (+) | 903 | WP_006595677.1 | phosphodiester glycosidase family protein | - |
| DQL20_RS08870 (NCTC11371_01735) | - | 1699856..1700263 (+) | 408 | WP_006595676.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 164 a.a. Molecular weight: 17849.59 Da Isoelectric Point: 4.7079
>NTDB_id=1141757 DQL20_RS08850 WP_006595680.1 1696844..1697338(-) (ssb) [Streptococcus australis strain NCTC13166]
MINNVVLVGRMTRDAELRYTPQNQAVATFSLAVNRNFKNQNGERDADFINCVIWRQQAENLANWAKKGALVGITGRIQTR
NYENQQGQRVYVTEVVADSFQLLESRANREGQAGGGYASAGGFAGNAAPSFGGSEPSNATPNFGRDDNPFGANPMDISDD
DLPF
MINNVVLVGRMTRDAELRYTPQNQAVATFSLAVNRNFKNQNGERDADFINCVIWRQQAENLANWAKKGALVGITGRIQTR
NYENQQGQRVYVTEVVADSFQLLESRANREGQAGGGYASAGGFAGNAAPSFGGSEPSNATPNFGRDDNPFGANPMDISDD
DLPF
Nucleotide
Download Length: 495 bp
>NTDB_id=1141757 DQL20_RS08850 WP_006595680.1 1696844..1697338(-) (ssb) [Streptococcus australis strain NCTC13166]
ATGATTAACAATGTTGTACTTGTAGGTCGTATGACTCGAGATGCTGAACTTCGTTATACCCCTCAAAATCAGGCTGTTGC
GACATTCTCACTCGCGGTTAACCGTAATTTTAAAAACCAAAATGGTGAACGAGATGCGGACTTTATCAACTGTGTGATTT
GGCGTCAACAAGCTGAAAATTTAGCGAATTGGGCTAAAAAGGGTGCCTTAGTTGGGATTACAGGTCGTATCCAGACTCGT
AATTATGAGAATCAGCAAGGTCAACGTGTTTATGTCACTGAAGTCGTAGCGGACAGCTTCCAATTGTTGGAAAGCCGCGC
GAATCGTGAAGGACAAGCAGGTGGTGGTTATGCTTCAGCTGGAGGATTTGCAGGAAATGCAGCTCCAAGCTTTGGAGGAT
CTGAACCATCAAATGCAACACCAAACTTTGGACGTGATGACAATCCATTCGGAGCTAATCCAATGGACATCTCGGATGAC
GATCTACCATTCTAA
ATGATTAACAATGTTGTACTTGTAGGTCGTATGACTCGAGATGCTGAACTTCGTTATACCCCTCAAAATCAGGCTGTTGC
GACATTCTCACTCGCGGTTAACCGTAATTTTAAAAACCAAAATGGTGAACGAGATGCGGACTTTATCAACTGTGTGATTT
GGCGTCAACAAGCTGAAAATTTAGCGAATTGGGCTAAAAAGGGTGCCTTAGTTGGGATTACAGGTCGTATCCAGACTCGT
AATTATGAGAATCAGCAAGGTCAACGTGTTTATGTCACTGAAGTCGTAGCGGACAGCTTCCAATTGTTGGAAAGCCGCGC
GAATCGTGAAGGACAAGCAGGTGGTGGTTATGCTTCAGCTGGAGGATTTGCAGGAAATGCAGCTCCAAGCTTTGGAGGAT
CTGAACCATCAAATGCAACACCAAACTTTGGACGTGATGACAATCCATTCGGAGCTAATCCAATGGACATCTCGGATGAC
GATCTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
58.046 |
100 |
0.616 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
56.897 |
100 |
0.604 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
55.046 |
66.463 |
0.366 |