Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   DQL20_RS07765 Genome accession   NZ_LS483444
Coordinates   1478148..1479152 (-) Length   334 a.a.
NCBI ID   WP_006595886.1    Uniprot ID   A0A127TTE3
Organism   Streptococcus australis strain NCTC13166     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1473148..1484152
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL20_RS07750 (NCTC11371_01516) thrS 1473454..1475397 (-) 1944 WP_006595889.1 threonine--tRNA ligase -
  DQL20_RS07755 (NCTC11371_01518) - 1475730..1477052 (-) 1323 WP_006595888.1 glycosyltransferase family 4 protein -
  DQL20_RS07760 (NCTC11371_01519) - 1477054..1478052 (-) 999 WP_006597024.1 glycosyltransferase family 4 protein -
  DQL20_RS07765 (NCTC11371_01520) ccpA 1478148..1479152 (-) 1005 WP_006595886.1 catabolite control protein A Regulator
  DQL20_RS07770 (NCTC11371_01521) - 1479313..1480395 (+) 1083 WP_006595885.1 Xaa-Pro peptidase family protein -
  DQL20_RS07775 (NCTC11371_01522) - 1480489..1480758 (+) 270 WP_231911649.1 cytochrome O ubiquinol oxidase -
  DQL20_RS07780 (NCTC11371_01523) - 1480854..1481303 (-) 450 WP_006595883.1 Rrf2 family transcriptional regulator -
  DQL20_RS07785 (NCTC11371_01524) - 1481447..1482289 (-) 843 WP_006595882.1 metallophosphoesterase -

Sequence

Protein


Download         Length: 334 a.a.        Molecular weight: 37005.12 Da        Isoelectric Point: 6.6646

>NTDB_id=1141754 DQL20_RS07765 WP_006595886.1 1478148..1479152(-) (ccpA) [Streptococcus australis strain NCTC13166]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIERLDYRPNAVARGLASKKTTTVGVVIPNITNSYFS
TLAKGIDDIAEMYKYNIVLANSDEDDDKEVSVVNTLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVEHQLPS
VNIDYKQATVDAVTLLAKRNKKIAFVSGPLVDDINGKIRLAGYKDALKAKKLSYSEGLVFESKYRYEEGYNLAERIIASK
ATAAFVTGDELAAGLLNGLADQGVNVPEDFELITSDDSQITRYTRPNLSTVGQPLYDLGAISMRMLTKIMHKEELEEREV
LLAHTINHRGTTKK

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=1141754 DQL20_RS07765 WP_006595886.1 1478148..1479152(-) (ccpA) [Streptococcus australis strain NCTC13166]
ATGAATACAGACGATACTGTAACCATTTACGACGTTGCCCGAGAGGCGGGTGTCTCAATGGCGACTGTTAGCCGTGTCGT
GAACGGAAATAAGAACGTTAAGGAAAATACTCGTAAAAAAGTATTGGAAGTCATTGAACGTTTGGACTATCGTCCGAATG
CAGTAGCTCGTGGACTTGCGAGTAAGAAAACCACAACGGTAGGTGTTGTGATTCCAAATATTACCAATAGTTATTTCTCT
ACTCTGGCAAAGGGGATCGATGACATTGCTGAAATGTACAAGTACAACATCGTCCTTGCCAACAGCGATGAAGACGATGA
TAAAGAAGTTTCTGTTGTCAATACTCTTTTCTCAAAACAGGTCGATGGGATTATCTTCATGGGTTACCACTTGACAGAAA
AGATTCGTTCAGAATTCTCTCGTTCTCGGACACCGGTGGTCCTTGCTGGGACAGTTGATGTCGAACATCAATTGCCAAGT
GTCAATATCGATTACAAGCAAGCGACAGTAGACGCGGTTACACTATTGGCTAAACGAAATAAAAAGATTGCTTTTGTAAG
TGGACCATTAGTAGATGATATCAACGGTAAGATTCGCTTGGCTGGCTACAAAGATGCTTTGAAAGCAAAAAAATTGTCTT
ACAGTGAAGGCTTGGTCTTTGAGTCTAAATACCGCTATGAAGAAGGCTATAACTTAGCTGAACGCATCATTGCATCTAAA
GCAACAGCAGCCTTTGTAACTGGGGATGAATTGGCAGCAGGTTTGCTTAATGGTCTTGCTGATCAAGGTGTGAACGTACC
GGAAGATTTTGAGTTGATTACCAGTGATGATTCACAAATTACACGCTACACTCGTCCAAATCTTTCAACTGTTGGCCAAC
CACTTTATGATTTGGGGGCTATCAGTATGCGGATGCTGACAAAAATTATGCATAAGGAAGAATTGGAAGAAAGAGAAGTT
CTTCTTGCCCATACCATCAATCATCGTGGAACTACGAAGAAGTAA

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(175-332)

Bacterial regulatory proteins, lacI family (LacI)

(8-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A127TTE3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

91.018

100

0.91
  ccpA Streptococcus pneumoniae D39

85.03

100

0.85
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

57.1

99.102

0.566

Multiple sequence alignment