Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   DQL20_RS07725 Genome accession   NZ_LS483444
Coordinates   1468002..1468811 (-) Length   269 a.a.
NCBI ID   WP_006595893.1    Uniprot ID   E7SBS6
Organism   Streptococcus australis strain NCTC13166     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1463002..1473811
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL20_RS07710 (NCTC11371_01508) smc 1463159..1466704 (-) 3546 WP_006595896.1 chromosome segregation protein SMC -
  DQL20_RS07715 (NCTC11371_01509) rnc 1466695..1467396 (-) 702 WP_006596983.1 ribonuclease III -
  DQL20_RS07720 (NCTC11371_01510) - 1467555..1467944 (-) 390 WP_006595894.1 YbaN family protein -
  DQL20_RS07725 (NCTC11371_01511) vicX 1468002..1468811 (-) 810 WP_006595893.1 MBL fold metallo-hydrolase Regulator
  DQL20_RS07730 (NCTC11371_01512) micB 1468820..1470166 (-) 1347 WP_006595892.1 cell wall metabolism sensor histidine kinase VicK Regulator
  DQL20_RS07735 (NCTC11371_01513) micA 1470159..1470860 (-) 702 WP_006595891.1 response regulator YycF Regulator
  DQL20_RS07740 (NCTC11371_01514) - 1471436..1472485 (+) 1050 WP_006595890.1 DUF389 domain-containing protein -
  DQL20_RS07745 (NCTC11371_01515) tnpA 1472768..1473232 (-) 465 WP_006596946.1 IS200/IS605 family transposase -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 29730.70 Da        Isoelectric Point: 5.7538

>NTDB_id=1141751 DQL20_RS07725 WP_006595893.1 1468002..1468811(-) (vicX) [Streptococcus australis strain NCTC13166]
MDEKGFKYSILASGSSGNSFYIETPKKKILVDAGLSGKKITGLLAEIDRKPEDLDAILITHEHSDHIHGVGVLARKYGMD
LYANEATWKAMEGSKYLGKVDDSQKHLFEMGKTLTFGDLDVESFGVSHDAAAPQFYRFMKDGKSFVMLTDTGYVSDRMAG
IIENADGYLIESNHDVEILRAGSYAWRLKQRILSDLGHLSNEDGADAMIRTLGNKTKKIYLGHLSKENNIKELAHMTMVN
QLARADLAVGHDFDVLDTSPDTATPLVDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1141751 DQL20_RS07725 WP_006595893.1 1468002..1468811(-) (vicX) [Streptococcus australis strain NCTC13166]
ATGGATGAAAAAGGGTTTAAGTATAGTATTTTAGCTTCAGGATCGAGTGGTAATTCTTTTTACATAGAGACTCCTAAGAA
GAAAATTCTAGTAGATGCAGGCTTGTCCGGGAAGAAAATTACAGGTTTGCTTGCAGAGATTGATCGCAAACCCGAAGATC
TTGATGCTATTTTGATCACACATGAACATTCGGATCACATTCATGGCGTTGGTGTGCTAGCTCGTAAATACGGGATGGAC
CTATACGCCAATGAAGCTACCTGGAAGGCCATGGAGGGAAGCAAATACCTTGGGAAGGTCGATGACTCCCAGAAACATTT
ATTTGAAATGGGCAAGACCTTAACCTTCGGGGATTTGGATGTGGAAAGTTTTGGTGTCAGCCATGATGCTGCGGCTCCCC
AGTTCTATCGGTTCATGAAGGATGGGAAGAGCTTTGTCATGCTGACCGATACAGGTTATGTCAGTGATCGAATGGCAGGG
ATTATTGAAAATGCAGATGGCTATTTGATCGAGTCCAACCACGATGTGGAAATTCTACGAGCTGGCTCTTATGCTTGGCG
ATTAAAGCAGCGGATTTTATCTGATTTGGGCCACCTCTCTAATGAAGATGGTGCGGATGCCATGATTCGGACTCTAGGCA
ATAAGACTAAGAAAATTTATCTGGGCCACTTATCGAAAGAAAACAATATCAAGGAATTGGCCCATATGACCATGGTTAAT
CAACTGGCTCGAGCAGATCTAGCAGTGGGGCATGATTTTGACGTCTTGGATACATCTCCAGATACAGCGACTCCATTAGT
AGATATCTAG

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB E7SBS6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

78.067

100

0.781

Multiple sequence alignment