Detailed information NTG0114159

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HPOKI128_RS01705
• Genome accession: NZ_CP006822
• Coordinates: 337243..338043 (+)
• Length: 266 a.a.
• NCBI ID: WP_025287925.1
• Uniprot ID: -
• Organism: Helicobacter pylori oki128
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 332243..343043

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPOKI128_RS01670 (HPOKI128_01750)	pseH	332743..333285 (+)	543	WP_025287921.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HPOKI128_RS01675 (HPOKI128_01755)	-	333218..334156 (-)	939	WP_025287922.1	tetraacyldisaccharide 4'-kinase	-
HPOKI128_RS01680 (HPOKI128_01760)	-	334153..334935 (-)	783	WP_025287923.1	NAD+ synthase	-
HPOKI128_RS01690	ilvC	335184..336176 (+)	993	WP_025287924.1	ketol-acid reductoisomerase	-
HPOKI128_RS01695 (HPOKI128_01775)	minD	336195..337001 (+)	807	WP_001019097.1	septum site-determining protein MinD	-
HPOKI128_RS01700 (HPOKI128_01780)	minE	336998..337231 (+)	234	WP_000051412.1	cell division topological specificity factor MinE	-
HPOKI128_RS01705 (HPOKI128_01785)	dprA	337243..338043 (+)	801	WP_025287925.1	DNA-processing protein DprA	Machinery gene
HPOKI128_RS01710 (HPOKI128_01790)	dprB	338040..338444 (+)	405	WP_025287926.1	Holliday junction resolvase RuvX	Machinery gene
HPOKI128_RS01715 (HPOKI128_01795)	-	338503..338934 (+)	432	WP_038416393.1	tetratricopeptide repeat protein	-
HPOKI128_RS01720 (HPOKI128_01800)	-	339124..339462 (+)	339	WP_025287928.1	hypothetical protein	-
HPOKI128_RS01725 (HPOKI128_01805)	-	339446..340012 (+)	567	WP_025287929.1	hypothetical protein	-
HPOKI128_RS01730 (HPOKI128_01815)	-	340185..341066 (-)	882	WP_025222566.1	RluA family pseudouridine synthase	-
HPOKI128_RS01735 (HPOKI128_01820)	recJ	341066..342580 (-)	1515	WP_235180481.1	single-stranded-DNA-specific exonuclease RecJ	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29825.66 Da
• Isoelectric Point: 8.3943

>NTDB_id=114159 HPOKI128_RS01705 WP_025287925.1 337243..338043(+) (dprA) [Helicobacter pylori oki128]
MKSNFQYSTLENIPKAFDILKDPPKKLYYAGDIKLLDAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQHLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEIKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=114159 HPOKI128_RS01705 WP_025287925.1 337243..338043(+) (dprA) [Helicobacter pylori oki128]
ATGAAAAGCAACTTCCAATACAGCACGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTATGCGGGCGATATAAAGCTTTTAGACGCACCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCTACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCCAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTAATTATCCCCCAAGCGGATTTGAAAAGCGGC
TCTATGAGCAGCGCGAGACTCGCCCAAAAGTATCAAAAACCCTTATTTGTTTTGCCCCAGCACCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGACAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATCAAAGACGAATTTTTAGAATATTGCGCCAAAAATCCGAGCTATGAAGAGGCGTAT
CTCAAATTTGGAGACAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	95.865	100	0.959
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.035	86.09	0.414