Detailed information NTG0114129

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HPOKI102_RS01875
• Genome accession: NZ_CP006820
• Coordinates: 387133..387933 (+)
• Length: 266 a.a.
• NCBI ID: WP_025275690.1
• Uniprot ID: -
• Organism: Helicobacter pylori oki102
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 382133..392933

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPOKI102_RS01840 (HPOKI102_01950)	pseH	382638..383180 (+)	543	WP_025275685.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HPOKI102_RS01845 (HPOKI102_01955)	-	383113..384051 (-)	939	WP_025275686.1	tetraacyldisaccharide 4'-kinase	-
HPOKI102_RS01850 (HPOKI102_01960)	-	384048..384830 (-)	783	WP_025275687.1	NAD+ synthase	-
HPOKI102_RS01860	ilvC	385079..386071 (+)	993	WP_025275688.1	ketol-acid reductoisomerase	-
HPOKI102_RS01865 (HPOKI102_01975)	minD	386090..386896 (+)	807	WP_025275689.1	septum site-determining protein MinD	-
HPOKI102_RS01870 (HPOKI102_01980)	minE	386893..387126 (+)	234	WP_000051414.1	cell division topological specificity factor MinE	-
HPOKI102_RS01875 (HPOKI102_01985)	dprA	387133..387933 (+)	801	WP_025275690.1	DNA-processing protein DprA	Machinery gene
HPOKI102_RS01880 (HPOKI102_01990)	dprB	387930..388334 (+)	405	WP_025275691.1	Holliday junction resolvase RuvX	Machinery gene
HPOKI102_RS01885 (HPOKI102_02000)	-	388466..389032 (+)	567	WP_025275692.1	tetratricopeptide repeat protein	-
HPOKI102_RS01890 (HPOKI102_02005)	-	389217..389555 (+)	339	WP_025275693.1	hypothetical protein	-
HPOKI102_RS01895 (HPOKI102_02010)	-	389539..390099 (+)	561	WP_025275694.1	hypothetical protein	-
HPOKI102_RS01900 (HPOKI102_02015)	-	390201..391082 (-)	882	WP_025275695.1	RluA family pseudouridine synthase	-
HPOKI102_RS01905 (HPOKI102_02020)	recJ	391082..392632 (-)	1551	WP_025275696.1	single-stranded-DNA-specific exonuclease RecJ	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29912.86 Da
• Isoelectric Point: 8.5818

>NTDB_id=114129 HPOKI102_RS01875 WP_025275690.1 387133..387933(+) (dprA) [Helicobacter pylori oki102]
MKSNFQYSTLENIPKAFDILKDPPKKLYCVGDIKLLRAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMEDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHLVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=114129 HPOKI102_RS01875 WP_025275690.1 387133..387933(+) (dprA) [Helicobacter pylori oki102]
ATGAAAAGTAATTTCCAATACAGCACGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAACT
CTATTGTGTGGGCGATATAAAGCTTTTGAGAGCACCTTTAAAAGTGGCTATCATAGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTGGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTCATCTATCCTACAAA
CAATCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTCATGCCCATTAAAG
GCTCTTTTTTAGCCAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTAATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCTCAAAAATACCAAAAGCCATTATTTGTTTTACCCCAGCGCTTGAATGAAAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATGGAAGATGAATTTTTAGAATATTGTGCGAAAAACCCTAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGCATTAATCATCTCGTGGTGTTAGCATG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	97.744	100	0.977
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414