Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   DQN21_RS09110 Genome accession   NZ_LS483409
Coordinates   1827968..1828777 (-) Length   269 a.a.
NCBI ID   WP_009854644.1    Uniprot ID   A0A1H7V9H2
Organism   Streptococcus gallolyticus strain NCTC13773     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1822968..1833777
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN21_RS09100 (NCTC13773_01851) smc 1823106..1826645 (-) 3540 WP_077497389.1 chromosome segregation protein SMC -
  DQN21_RS09105 (NCTC13773_01852) rnc 1826776..1827462 (-) 687 WP_009854642.1 ribonuclease III -
  DQN21_RS09110 (NCTC13773_01853) vicX 1827968..1828777 (-) 810 WP_009854644.1 MBL fold metallo-hydrolase Regulator
  DQN21_RS09115 (NCTC13773_01854) vicK 1828778..1830130 (-) 1353 WP_077497391.1 cell wall metabolism sensor histidine kinase VicK Regulator
  DQN21_RS09120 (NCTC13773_01855) vicR 1830123..1830833 (-) 711 WP_009854646.1 response regulator YycF Regulator
  DQN21_RS09125 (NCTC13773_01856) - 1831134..1831898 (+) 765 WP_009854647.1 amino acid ABC transporter ATP-binding protein -
  DQN21_RS09130 (NCTC13773_01857) - 1831909..1832721 (+) 813 WP_077497393.1 transporter substrate-binding domain-containing protein -
  DQN21_RS09135 (NCTC13773_01858) - 1832738..1833442 (+) 705 WP_009854649.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30298.24 Da        Isoelectric Point: 5.3852

>NTDB_id=1140577 DQN21_RS09110 WP_009854644.1 1827968..1828777(-) (vicX) [Streptococcus gallolyticus strain NCTC13773]
MSENAFKYSILASGSTGNSFYVETPQKRFLIDAGLTGKKITSLLAEIDRKPEDLDAIFITHEHSDHIKGVGVLARRYNLD
VYANEKTWQMIDERNMIGKLDLAQKHIFERGKTLTLGDIDIESFGVSHDAVEPQFYRLMKDNKSFVVLTDTGYVSDRMAG
IIENADGYLIESNHDVEILRSGSYPWSLKQRILSDKGHLSNEDGAGTMIRTIGNRTKKIYLGHLSKENNIKELAHMTMEN
NLIQADFGVGYDMKVFDTSPDEATPLTEL

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1140577 DQN21_RS09110 WP_009854644.1 1827968..1828777(-) (vicX) [Streptococcus gallolyticus strain NCTC13773]
ATGTCTGAAAATGCTTTTAAATATAGTATTTTAGCCTCCGGTTCAACTGGAAATTCTTTTTATGTGGAAACACCACAAAA
ACGTTTTTTGATTGATGCGGGTTTGACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCAGAAGACT
TAGATGCTATTTTTATTACACACGAACATTCTGACCATATCAAAGGGGTTGGGGTGTTAGCACGTCGTTATAATCTTGAT
GTTTATGCGAATGAAAAAACGTGGCAAATGATTGATGAGCGAAATATGATTGGAAAGCTTGATTTAGCTCAAAAACATAT
TTTTGAACGTGGGAAAACATTGACACTTGGTGACATTGATATTGAAAGTTTTGGTGTTAGCCACGATGCCGTTGAGCCAC
AATTTTACCGTTTGATGAAAGATAATAAATCGTTTGTTGTCTTAACAGATACAGGTTATGTTAGTGATCGCATGGCAGGG
ATTATTGAAAATGCTGACGGTTACTTGATTGAATCGAATCATGACGTTGAGATTTTACGTTCAGGCTCTTATCCGTGGAG
TTTGAAACAACGTATCCTATCTGATAAAGGACACTTGTCAAACGAAGATGGTGCTGGGACAATGATTCGAACGATTGGAA
ATCGCACGAAGAAAATTTACCTTGGACATTTGAGTAAAGAAAACAATATCAAAGAATTGGCTCACATGACCATGGAAAAT
AATCTTATTCAAGCTGACTTTGGGGTTGGTTATGACATGAAAGTCTTTGATACCTCACCAGACGAAGCAACACCATTAAC
AGAGTTATAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-216)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1H7V9H2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.58

100

0.766

Multiple sequence alignment