Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | DQN23_RS00740 | Genome accession | NZ_LS483403 |
| Coordinates | 108824..109780 (+) | Length | 318 a.a. |
| NCBI ID | WP_020915994.1 | Uniprot ID | A0AB33AJ02 |
| Organism | Streptococcus lutetiensis strain NCTC13774 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 103824..114780
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQN23_RS00700 (NCTC13774_00141) | - | 104724..105092 (+) | 369 | WP_020915986.1 | DUF1033 family protein | - |
| DQN23_RS00705 (NCTC13774_00142) | comYA | 105164..106105 (+) | 942 | WP_020915987.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| DQN23_RS00710 (NCTC13774_00143) | comYB | 106029..107072 (+) | 1044 | WP_020915988.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| DQN23_RS00715 (NCTC13774_00144) | comYC | 107072..107365 (+) | 294 | WP_020915989.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| DQN23_RS00720 (NCTC13774_00145) | comYD | 107349..107780 (+) | 432 | WP_020915990.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| DQN23_RS00725 (NCTC13774_00146) | comYE | 107734..108027 (+) | 294 | WP_020915991.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| DQN23_RS00730 (NCTC13774_00147) | comYF | 108011..108448 (+) | 438 | WP_043894883.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| DQN23_RS00735 (NCTC13774_00148) | comGG | 108420..108770 (+) | 351 | WP_020915993.1 | competence type IV pilus minor pilin ComGG | - |
| DQN23_RS00740 (NCTC13774_00149) | comYH | 108824..109780 (+) | 957 | WP_020915994.1 | class I SAM-dependent methyltransferase | Machinery gene |
| DQN23_RS00745 (NCTC13774_00150) | - | 109834..111033 (+) | 1200 | WP_020915995.1 | acetate kinase | - |
| DQN23_RS00750 (NCTC13774_00151) | - | 111193..111390 (+) | 198 | WP_020915996.1 | helix-turn-helix transcriptional regulator | - |
| DQN23_RS00755 (NCTC13774_00152) | - | 111407..111607 (+) | 201 | WP_058814360.1 | hypothetical protein | - |
| DQN23_RS00760 (NCTC13774_00153) | - | 111608..112063 (+) | 456 | WP_231853254.1 | ABC transporter permease | - |
| DQN23_RS00765 (NCTC13774_00154) | - | 112078..112713 (+) | 636 | WP_111712559.1 | CPBP family intramembrane glutamic endopeptidase | - |
| DQN23_RS00770 (NCTC13774_00155) | proC | 112750..113520 (-) | 771 | WP_020916000.1 | pyrroline-5-carboxylate reductase | - |
| DQN23_RS00775 (NCTC13774_00156) | pepA | 113582..114649 (-) | 1068 | WP_111712560.1 | glutamyl aminopeptidase | - |
Sequence
Protein
Download Length: 318 a.a. Molecular weight: 35938.07 Da Isoelectric Point: 4.4591
>NTDB_id=1140328 DQN23_RS00740 WP_020915994.1 108824..109780(+) (comYH) [Streptococcus lutetiensis strain NCTC13774]
MNFEKIETAYGLILENIQLIENELKTHIYDALIEQNSFYLGAEGANETVAANNEKLRQLDLTKEEWRRAFQFIFIKAAQT
EALQANHQFTPDAIGFILMFLIENLTASKELDVLEIGSGTGNLAQTLLNNSSKDLNYLGIEVDDLLIDLSASIAEVMDSK
AQFIQEDAVRPQILKESDVIISDLPVGFYPNDEIAKRYKVASSEEHTYAHHLLMEQSLKYLKKDGIAVFLAPVSLLTSKQ
SDLLKAWLKDYADVIAVITLPEPIFGNAANAKSIFVLKKQAEHTPETFVYPLADLQSREVLTDFIEKFKKWNVENMIF
MNFEKIETAYGLILENIQLIENELKTHIYDALIEQNSFYLGAEGANETVAANNEKLRQLDLTKEEWRRAFQFIFIKAAQT
EALQANHQFTPDAIGFILMFLIENLTASKELDVLEIGSGTGNLAQTLLNNSSKDLNYLGIEVDDLLIDLSASIAEVMDSK
AQFIQEDAVRPQILKESDVIISDLPVGFYPNDEIAKRYKVASSEEHTYAHHLLMEQSLKYLKKDGIAVFLAPVSLLTSKQ
SDLLKAWLKDYADVIAVITLPEPIFGNAANAKSIFVLKKQAEHTPETFVYPLADLQSREVLTDFIEKFKKWNVENMIF
Nucleotide
Download Length: 957 bp
>NTDB_id=1140328 DQN23_RS00740 WP_020915994.1 108824..109780(+) (comYH) [Streptococcus lutetiensis strain NCTC13774]
ATGAATTTTGAAAAAATCGAAACAGCTTACGGGCTGATTCTAGAAAATATACAGTTAATCGAAAATGAGTTGAAAACACA
CATTTACGATGCTCTTATTGAACAAAACTCTTTTTATCTTGGTGCTGAAGGTGCCAATGAGACAGTAGCTGCTAATAATG
AAAAACTACGCCAACTTGATTTAACTAAAGAAGAATGGCGTCGTGCTTTTCAGTTTATTTTTATTAAAGCTGCTCAAACA
GAAGCACTTCAGGCAAATCACCAATTTACACCTGATGCAATTGGCTTTATCTTAATGTTCCTTATTGAGAATTTGACAGC
TTCAAAAGAACTTGATGTTTTAGAAATTGGTAGCGGAACAGGTAACCTTGCACAAACCTTGCTCAATAATTCATCTAAAG
ACTTGAATTACCTTGGAATTGAAGTTGATGATTTGTTGATTGACTTGTCAGCAAGTATTGCCGAAGTGATGGATTCTAAA
GCTCAGTTCATTCAAGAAGATGCTGTGCGCCCACAGATTCTTAAAGAAAGTGACGTCATCATCAGTGACCTTCCAGTCGG
CTTCTATCCCAATGATGAAATTGCAAAACGCTACAAAGTAGCAAGCAGTGAAGAACACACTTATGCGCATCATTTGTTGA
TGGAACAATCTCTCAAATATCTCAAAAAAGATGGTATTGCTGTCTTTTTAGCACCGGTTAGTCTTTTGACAAGTAAACAA
AGTGATTTGTTAAAGGCATGGTTGAAGGATTACGCTGATGTTATTGCGGTGATTACTTTACCAGAACCTATTTTCGGCAA
TGCGGCCAATGCTAAGTCAATTTTTGTCTTGAAGAAACAGGCTGAACATACTCCAGAAACATTTGTTTACCCGCTTGCTG
ACTTGCAAAGTCGCGAAGTTTTAACAGATTTTATTGAGAAATTTAAAAAATGGAATGTTGAAAATATGATTTTTTAA
ATGAATTTTGAAAAAATCGAAACAGCTTACGGGCTGATTCTAGAAAATATACAGTTAATCGAAAATGAGTTGAAAACACA
CATTTACGATGCTCTTATTGAACAAAACTCTTTTTATCTTGGTGCTGAAGGTGCCAATGAGACAGTAGCTGCTAATAATG
AAAAACTACGCCAACTTGATTTAACTAAAGAAGAATGGCGTCGTGCTTTTCAGTTTATTTTTATTAAAGCTGCTCAAACA
GAAGCACTTCAGGCAAATCACCAATTTACACCTGATGCAATTGGCTTTATCTTAATGTTCCTTATTGAGAATTTGACAGC
TTCAAAAGAACTTGATGTTTTAGAAATTGGTAGCGGAACAGGTAACCTTGCACAAACCTTGCTCAATAATTCATCTAAAG
ACTTGAATTACCTTGGAATTGAAGTTGATGATTTGTTGATTGACTTGTCAGCAAGTATTGCCGAAGTGATGGATTCTAAA
GCTCAGTTCATTCAAGAAGATGCTGTGCGCCCACAGATTCTTAAAGAAAGTGACGTCATCATCAGTGACCTTCCAGTCGG
CTTCTATCCCAATGATGAAATTGCAAAACGCTACAAAGTAGCAAGCAGTGAAGAACACACTTATGCGCATCATTTGTTGA
TGGAACAATCTCTCAAATATCTCAAAAAAGATGGTATTGCTGTCTTTTTAGCACCGGTTAGTCTTTTGACAAGTAAACAA
AGTGATTTGTTAAAGGCATGGTTGAAGGATTACGCTGATGTTATTGCGGTGATTACTTTACCAGAACCTATTTTCGGCAA
TGCGGCCAATGCTAAGTCAATTTTTGTCTTGAAGAAACAGGCTGAACATACTCCAGAAACATTTGTTTACCCGCTTGCTG
ACTTGCAAAGTCGCGAAGTTTTAACAGATTTTATTGAGAAATTTAAAAAATGGAATGTTGAAAATATGATTTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
68.354 |
99.371 |
0.679 |
| comYH | Streptococcus mutans UA159 |
68.038 |
99.371 |
0.676 |