Detailed information    

insolico Bioinformatically predicted

Overview


Name   vicK   Type   Regulator
Locus tag   DQM81_RS07575 Genome accession   NZ_LS483389
Coordinates   1461600..1462952 (-) Length   450 a.a.
NCBI ID   WP_063631274.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC10879     
Function   repress comCDE expression; repress comX expression (predicted from homology)   
Competence regulation

Genomic Context


Location: 1456600..1467952
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM81_RS07565 (NCTC10879_01521) rnc 1459653..1460345 (-) 693 WP_002990670.1 ribonuclease III -
  DQM81_RS07570 (NCTC10879_01522) vicX 1460787..1461596 (-) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  DQM81_RS07575 (NCTC10879_01523) vicK 1461600..1462952 (-) 1353 WP_063631274.1 cell wall metabolism sensor histidine kinase VicK Regulator
  DQM81_RS07580 (NCTC10879_01524) vicR 1462945..1463655 (-) 711 WP_002985645.1 response regulator YycF Regulator
  DQM81_RS07585 (NCTC10879_01525) - 1463817..1464851 (-) 1035 WP_172451775.1 DUF3114 domain-containing protein -
  DQM81_RS07590 (NCTC10879_01526) - 1464907..1466154 (-) 1248 WP_111688334.1 AMP-binding protein -
  DQM81_RS07595 (NCTC10879_01527) - 1466111..1467259 (-) 1149 WP_011054267.1 acetyl-CoA C-acyltransferase -
  DQM81_RS07600 - 1467654..1467803 (-) 150 WP_011285429.1 hypothetical protein -

Sequence


Protein


Download         Length: 450 a.a.        Molecular weight: 51449.86 Da        Isoelectric Point: 5.2780

>NTDB_id=1139865 DQM81_RS07575 WP_063631274.1 1461600..1462952(-) (vicK) [Streptococcus pyogenes strain NCTC10879]
MTRDIIGNLSTFELAILILLVFVAFYFIHLAVRDYRNARIIRMMSHKIRDLINGRYTDIIDEKADIELMELSDQLNDLSD
VFRLTHENLAQEKNRLASILAYMSDGVLATDRSGKIIMINETARKQLNLSKEEALKKNITDLLEGDTSYTYRDLVSKTPV
VTVNSRNDMGEFVSLRLRFALNRRESGFISGLVVVLHDTTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALK
EDIAPSFIKVSLDETNRMMRMISDLLNLSRIDNQVTQLAVEMTNFTAFITSILNRFDLVKNQHTDTGKVYEIVRDYPITS
VWIEIDNDKMTQVIENILNNAIKYSPDGGKITVRMKTTDTQLIISISDQGLGIPKTDLPLIFDRFYRVDKARSRAQGGTG
LGLAIAKEIIKQHHGFIWAKSDYGKGSTFTIVLPYEKDAAIYEEWEEDVD

Nucleotide


Download         Length: 1353 bp        

>NTDB_id=1139865 DQM81_RS07575 WP_063631274.1 1461600..1462952(-) (vicK) [Streptococcus pyogenes strain NCTC10879]
ATGACTAGAGATATCATTGGAAACTTATCCACATTTGAATTAGCGATCCTTATCTTACTTGTTTTTGTTGCTTTTTACTT
TATCCATCTTGCGGTGCGTGACTACCGAAATGCACGTATTATTCGGATGATGAGCCATAAAATCCGAGACTTGATTAATG
GTCGCTATACTGATATAATCGACGAAAAAGCAGACATTGAGTTAATGGAGCTTTCAGACCAGTTAAATGACCTGTCAGAT
GTTTTTCGCTTGACGCATGAAAATCTTGCCCAAGAAAAAAATCGCTTGGCAAGTATTTTGGCTTATATGTCAGATGGTGT
ACTTGCTACAGACCGGTCTGGTAAAATCATCATGATTAACGAGACAGCTCGCAAGCAATTAAATTTAAGTAAAGAAGAGG
CACTAAAGAAAAACATTACAGATTTGTTAGAAGGTGATACTTCATATACCTACCGTGATTTGGTATCCAAAACACCAGTG
GTAACTGTTAATAGCCGAAATGATATGGGTGAGTTTGTCTCATTACGCTTGCGCTTTGCGTTGAATAGGAGAGAGAGTGG
TTTTATTTCGGGCTTGGTTGTGGTGCTCCATGACACCACAGAACAAGAAAAAGAAGAACGTGAACGCCGTCTTTTTGTCT
CTAATGTAAGTCATGAATTAAGGACCCCTTTAACTTCGGTTAAATCCTACTTGGAGGCTCTTGATGAAGGTGCACTTAAA
GAAGATATTGCTCCAAGTTTCATAAAAGTTTCTCTTGATGAAACTAATCGGATGATGCGTATGATTTCAGATCTTTTAAA
CCTGTCTCGGATTGATAATCAAGTAACCCAATTAGCAGTAGAGATGACTAATTTTACTGCTTTTATAACTTCTATTTTAA
ACAGATTTGATTTGGTTAAAAATCAGCATACAGATACAGGAAAAGTCTATGAAATTGTAAGAGATTACCCTATTACCTCT
GTCTGGATTGAAATTGATAATGATAAAATGACACAGGTTATCGAGAATATTTTGAACAATGCCATTAAGTATTCTCCAGA
TGGTGGAAAAATTACAGTCCGTATGAAAACAACAGATACCCAATTAATTATTTCCATTTCAGACCAAGGACTAGGTATCC
CTAAAACAGATTTGCCTCTTATTTTTGATCGGTTCTATCGTGTAGACAAGGCAAGAAGTCGTGCCCAAGGAGGGACCGGT
CTAGGCCTTGCCATTGCTAAAGAAATCATCAAGCAGCACCATGGCTTTATCTGGGCTAAGAGTGACTATGGTAAAGGATC
GACCTTTACTATTGTCTTGCCTTATGAAAAAGATGCAGCCATCTATGAAGAATGGGAGGAAGATGTAGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicK Streptococcus mutans UA159

72.947

92

0.671

  micB Streptococcus pneumoniae Cp1015

67.765

94.444

0.64


Multiple sequence alignment