Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   DQM63_RS11525 Genome accession   NZ_LS483385
Coordinates   2295953..2296714 (+) Length   253 a.a.
NCBI ID   WP_002899523.1    Uniprot ID   F0IQA4
Organism   Streptococcus sanguinis strain NCTC7863     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2290953..2301714
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM63_RS11495 (NCTC7863_02270) comE 2291498..2292262 (-) 765 WP_002899529.1 competence system response regulator transcription factor ComE Regulator
  DQM63_RS11500 (NCTC7863_02271) comD 2292268..2293602 (-) 1335 WP_002899527.1 competence system sensor histidine kinase ComD -
  DQM63_RS11505 (NCTC7863_02272) - 2293630..2293737 (-) 108 WP_002894290.1 hypothetical protein -
  DQM63_RS11515 (NCTC7863_02274) rlmH 2294034..2294513 (-) 480 WP_002899526.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  DQM63_RS11520 (NCTC7863_02275) htrA 2294717..2295889 (+) 1173 WP_002899524.1 S1C family serine protease Regulator
  DQM63_RS11525 (NCTC7863_02276) spo0J 2295953..2296714 (+) 762 WP_002899523.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 253 a.a.        Molecular weight: 29338.10 Da        Isoelectric Point: 9.1242

>NTDB_id=1139665 DQM63_RS11525 WP_002899523.1 2295953..2296714(+) (spo0J) [Streptococcus sanguinis strain NCTC7863]
MENFQYIALKDIRTNPYQPRKEFSQKKIEELAASIKENGLIQPIILRKSSLFGYEILAGERRFRAASFLGLETIPAVVKE
LSDDEMLKQAIIENLQREDLNPIEEAESYQSLIDKGLTHDEIAKIMGKSRPYISNIVRLLQLSKEVRQAIKEEEISQGHA
RLLVPLKEEEQLLWLEKICREDLSVRAVEKLLQKKKSIKKKSNKELFAKSEEEKIKKILGLEVSIQLKSQSKGKLIIPFE
SEEEYQRIINSFK

Nucleotide


Download         Length: 762 bp        

>NTDB_id=1139665 DQM63_RS11525 WP_002899523.1 2295953..2296714(+) (spo0J) [Streptococcus sanguinis strain NCTC7863]
ATGGAAAACTTTCAATATATTGCACTTAAAGATATTCGAACCAATCCTTATCAGCCTCGTAAAGAGTTCTCACAAAAAAA
GATTGAAGAATTAGCGGCATCAATCAAAGAAAATGGTCTCATTCAACCAATCATTCTTCGGAAATCTTCACTTTTTGGCT
ATGAAATTTTAGCAGGAGAACGGAGATTTAGAGCTGCCTCTTTTCTTGGCTTAGAAACGATCCCAGCTGTCGTCAAAGAA
TTATCTGATGATGAAATGCTGAAACAGGCTATTATCGAAAATCTTCAAAGAGAAGACTTGAATCCTATAGAAGAAGCTGA
GTCTTATCAAAGTTTGATTGACAAAGGCTTGACACATGATGAAATTGCTAAAATCATGGGAAAATCTAGACCCTATATCA
GCAATATTGTCAGACTTTTACAGCTGTCTAAAGAAGTTCGCCAAGCTATCAAGGAAGAAGAGATTTCTCAAGGACATGCT
CGCCTGCTGGTTCCCTTGAAAGAAGAGGAACAGTTACTATGGCTGGAAAAGATCTGTCGAGAAGATTTATCGGTTCGAGC
AGTTGAAAAGCTTCTCCAGAAAAAAAAGAGCATCAAAAAGAAATCTAATAAAGAACTGTTTGCTAAATCTGAAGAGGAAA
AAATTAAAAAAATTCTCGGTCTGGAAGTTTCTATTCAGTTAAAAAGCCAGAGTAAAGGAAAGCTGATTATTCCTTTTGAA
AGCGAAGAAGAATATCAAAGAATTATAAACAGTTTTAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB F0IQA4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

52.191

99.209

0.518


Multiple sequence alignment