Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   DQM63_RS07635 Genome accession   NZ_LS483385
Coordinates   1544603..1545607 (-) Length   334 a.a.
NCBI ID   WP_002894913.1    Uniprot ID   A0A0B7GRU9
Organism   Streptococcus sanguinis strain NCTC7863     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1539603..1550607
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM63_RS07615 (NCTC7863_01501) - 1540746..1541147 (-) 402 WP_002899927.1 hypothetical protein -
  DQM63_RS07620 (NCTC7863_01503) - 1541483..1541965 (-) 483 WP_002913365.1 hypothetical protein -
  DQM63_RS07625 (NCTC7863_01504) - 1542034..1543356 (-) 1323 WP_002913364.1 glycosyltransferase family 4 protein -
  DQM63_RS07630 (NCTC7863_01505) - 1543358..1544356 (-) 999 WP_002904961.1 glycosyltransferase family 4 protein -
  DQM63_RS07635 (NCTC7863_01506) ccpA 1544603..1545607 (-) 1005 WP_002894913.1 catabolite control protein A Regulator
  DQM63_RS07640 (NCTC7863_01507) - 1545770..1546852 (+) 1083 WP_002913357.1 Xaa-Pro peptidase family protein -
  DQM63_RS07645 (NCTC7863_01508) dcm 1547265..1548305 (-) 1041 WP_002913356.1 DNA (cytosine-5-)-methyltransferase -
  DQM63_RS07650 (NCTC7863_01509) - 1548302..1549702 (-) 1401 WP_002913354.1 protein NO VEIN domain-containing protein -

Sequence

Protein


Download         Length: 334 a.a.        Molecular weight: 37010.05 Da        Isoelectric Point: 6.3717

>NTDB_id=1139639 DQM63_RS07635 WP_002894913.1 1544603..1545607(-) (ccpA) [Streptococcus sanguinis strain NCTC7863]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNITNSYFS
TLAKGIDDIAEMYKYNIVLANSDEDDDKEVSVVNTLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVEHQLPS
VNIDYKQATVDAVELLAKRNKKIAFVSGPLVDDINGKIRLSGYKDGLKNKKLSYSEGLVFESKYSYDDGYHLAERVIASK
ATAAFVTGDELAAGLLNGLSDQGIKVPEDFEIITSDDSQVARFTRPNLSTIGQPLYDIGAISMRMLTKIMHKEELEEREV
LLAHSISERKSTRK

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=1139639 DQM63_RS07635 WP_002894913.1 1544603..1545607(-) (ccpA) [Streptococcus sanguinis strain NCTC7863]
ATGAACACAGACGACACAGTAACCATTTATGATGTCGCCCGTGAAGCGGGAGTTTCGATGGCGACAGTCAGTCGGGTAGT
GAATGGAAACAAGAACGTCAAAGAAAACACACGTAAAAAAGTTTTAGAGGTCATTGATCGTCTTGACTATCGTCCAAATG
CAGTGGCACGAGGACTAGCCAGCAAGAAGACTACAACCGTCGGCGTTGTCATTCCAAATATTACCAATAGCTATTTCTCA
ACCTTGGCAAAAGGGATTGACGATATTGCTGAAATGTATAAATACAACATTGTCTTGGCTAACAGTGATGAGGACGATGA
TAAGGAAGTCTCCGTTGTCAATACCCTCTTTTCTAAGCAGGTGGATGGCATTATTTTCATGGGCTATCATCTGACAGAGA
AAATTCGCTCAGAGTTTTCACGTTCGCGTACACCGGTCGTTTTGGCGGGTACTGTTGATGTGGAGCATCAGCTTCCGAGC
GTCAATATTGACTACAAGCAAGCAACGGTTGATGCTGTAGAATTACTGGCTAAGCGCAATAAGAAAATTGCCTTTGTCAG
CGGACCGCTTGTTGATGATATCAACGGGAAAATCCGTCTATCAGGCTATAAAGATGGCTTGAAGAACAAGAAACTTTCAT
ACAGCGAAGGCTTGGTTTTTGAATCTAAATATTCTTATGATGATGGCTACCATTTGGCAGAGCGTGTCATTGCTTCCAAA
GCAACTGCGGCTTTTGTCACAGGAGATGAGTTGGCAGCAGGCCTCTTAAATGGTCTGTCTGATCAAGGCATCAAGGTTCC
AGAAGATTTTGAAATCATTACCAGTGATGATTCACAAGTAGCTCGTTTCACTCGTCCTAACCTTTCCACAATCGGTCAGC
CCCTCTATGACATCGGCGCTATCAGTATGCGCATGCTGACTAAGATTATGCATAAGGAAGAATTGGAAGAACGCGAAGTT
CTCCTAGCTCACAGCATTAGCGAGCGTAAATCAACTCGGAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, lacI family (LacI)

(8-53)

Periplasmic binding protein-like domain (Peripla_BP_3)

(175-332)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0B7GRU9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

91.916

100

0.919
  ccpA Streptococcus pneumoniae D39

86.826

100

0.868
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.589

99.102

0.551

Multiple sequence alignment