Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   DQM67_RS07165 Genome accession   NZ_LS483383
Coordinates   1429349..1430149 (-) Length   266 a.a.
NCBI ID   WP_037586201.1    Uniprot ID   A0A0F2CEY1
Organism   Streptococcus cristatus ATCC 51100 strain NCTC 12479     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1424349..1435149
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM67_RS07150 (NCTC12479_01386) rnc 1427842..1428531 (-) 690 WP_005589493.1 ribonuclease III -
  DQM67_RS07155 (NCTC12479_01387) - 1428677..1429036 (-) 360 WP_005589492.1 YbaN family protein -
  DQM67_RS07165 (NCTC12479_01388) vicX 1429349..1430149 (-) 801 WP_037586201.1 MBL fold metallo-hydrolase Regulator
  DQM67_RS07170 (NCTC12479_01389) micB 1430142..1431506 (-) 1365 WP_005589490.1 cell wall metabolism sensor histidine kinase VicK Regulator
  DQM67_RS07175 (NCTC12479_01390) micA 1431499..1432200 (-) 702 WP_005589489.1 response regulator YycF Regulator
  DQM67_RS07180 (NCTC12479_01391) - 1432463..1433545 (+) 1083 WP_005589486.1 Xaa-Pro peptidase family protein -
  DQM67_RS07185 - 1433597..1434104 (-) 508 Protein_1330 methylated-DNA--[protein]-cysteine S-methyltransferase -
  DQM67_RS07190 (NCTC12479_01394) - 1434140..1434997 (-) 858 WP_005589479.1 VOC family protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29727.68 Da        Isoelectric Point: 5.9437

>NTDB_id=1139512 DQM67_RS07165 WP_037586201.1 1429349..1430149(-) (vicX) [Streptococcus cristatus ATCC 51100 strain NCTC 12479]
MTKGFQYSILASGSSGNCFYLETDQKRLLVDAGLSGKKITSLLSEIDRKPEDLDAILVTHEHKDHIHGVGVLARKYNLDI
YANEATWRAMEKDLGKLDASQKHIFEMGKMKTFGDLDVESFGVSHDAAAPQFYRFMKDGKSFVMLTDTGYVSDRMAGVIE
NADAYLIESNHDIEILRSGAYPWSLKQRILSDLGHLSNEDGAETMIRTLGNRTKRIYLGHLSKENNIKELAHMTMVNQLA
QADLPVGHDFQVFDTSPDTATPLVNI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=1139512 DQM67_RS07165 WP_037586201.1 1429349..1430149(-) (vicX) [Streptococcus cristatus ATCC 51100 strain NCTC 12479]
ATGACTAAGGGATTTCAATATAGTATTCTAGCATCAGGCTCGAGTGGTAATTGCTTTTATCTGGAAACAGACCAAAAACG
CCTACTTGTCGATGCTGGTCTATCAGGGAAAAAAATTACGAGCCTTCTGAGCGAAATTGACCGCAAACCAGAAGATTTAG
ATGCTATTTTGGTCACCCATGAGCACAAGGATCACATCCATGGTGTGGGGGTTTTGGCGCGTAAATACAATCTAGATATT
TATGCCAACGAAGCAACCTGGCGAGCGATGGAAAAGGACTTGGGCAAGCTGGATGCCAGTCAGAAGCATATCTTTGAAAT
GGGTAAGATGAAAACCTTCGGCGACTTAGATGTCGAAAGTTTTGGAGTGAGCCACGATGCAGCTGCTCCCCAGTTTTATC
GCTTCATGAAGGATGGTAAGAGCTTTGTTATGCTGACGGATACGGGCTATGTCAGTGACCGTATGGCTGGAGTGATTGAG
AATGCAGATGCTTATTTGATTGAGAGCAATCATGATATTGAGATTCTCCGGAGCGGTGCCTACCCGTGGAGCCTGAAACA
GCGCATCCTATCTGACTTGGGACATTTATCCAATGAAGATGGTGCGGAAACCATGATTCGCACACTTGGCAATCGCACCA
AGCGCATCTATCTGGGGCATTTGAGCAAGGAAAATAATATCAAGGAGCTGGCTCATATGACCATGGTCAATCAACTGGCC
CAAGCTGACTTGCCAGTGGGTCATGATTTCCAAGTCTTTGATACCTCTCCCGACACTGCAACGCCTTTGGTAAATATCTA
A

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0F2CEY1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

80.228

98.872

0.793

Multiple sequence alignment